Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02688 and BPUM_1550
See
DNA alignment /
Visit
BSNT_02688 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:17
# Commandline: needle
# -asequence pep-align/BSNT_02688___pyrH.1.24716.seq
# -bsequence pep-align/BPUM_1550___pyrH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02688___pyrH-BPUM_1550___pyrH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02688___pyrH-BPUM_1550___pyrH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02688___pyrH
# 2: BPUM_1550___pyrH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 199/240 (82.9%)
# Similarity: 204/240 (85.0%)
# Gaps: 23/240 ( 9.6%)
# Score: 975.0
#
#
#=======================================
BSNT_02688___ 1 MEKPKYKRIVLKLSGEALAGEQGNGINPTVIQSIAKQVKEIAELEVEVAV 50
..:....|.||||||||||||:|||||
BPUM_1550___p 1 -----------------------MELTQLSIHSIAKQVKEIAELDVEVAV 27
BSNT_02688___ 51 VVGGGNLWRGKTGSDLGMDRATADYMGMLATVMNSLALQDSLETLGIQSR 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1550___p 28 VVGGGNLWRGKTGSDLGMDRATADYMGMLATVMNSLALQDSLETLGIQSR 77
BSNT_02688___ 101 VQTSIEMRQVAEPYIRRKAIRHLEKKRVVIFAAGTGNPYFSTDTTAALRA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1550___p 78 VQTSIEMRQVAEPYIRRKAIRHLEKKRVVIFAAGTGNPYFSTDTTAALRA 127
BSNT_02688___ 151 AEIEADVILMAKNNVDGVYNADPRKDESAVKYESLSYLDVLKDGLEVMDS 200
|||||||||||||||||||:||||.|..||||:.||||||||:||.||||
BPUM_1550___p 128 AEIEADVILMAKNNVDGVYSADPRTDADAVKYDKLSYLDVLKEGLAVMDS 177
BSNT_02688___ 201 TASSLCMDNDIPLIVFSIMEEGNIKRAVIGESIGTIVRGK 240
||||||||||||||||||||||||||||.|||||||||||
BPUM_1550___p 178 TASSLCMDNDIPLIVFSIMEEGNIKRAVNGESIGTIVRGK 217
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.