Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02688 and BPUM_1550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:17
# Commandline: needle
# -asequence dna-align/BSNT_02688___pyrH.1.24716.seq
# -bsequence dna-align/BPUM_1550___pyrH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02688___pyrH-BPUM_1550___pyrH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02688___pyrH-BPUM_1550___pyrH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02688___pyrH
# 2: BPUM_1550___pyrH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 729
# Identity: 536/729 (73.5%)
# Similarity: 536/729 (73.5%)
# Gaps: 81/729 (11.1%)
# Score: 2160.0
#
#
#=======================================
BSNT_02688___ 1 ATGGAAAAACCAAAATACAAACGTATCGTATTAAAGCTTAGCGGGGAAGC 50
BPUM_1550___p 0 -------------------------------------------------- 0
BSNT_02688___ 51 ATTGGCAGGAGAACAGGGAAATGGAATTAACCCGACTGTC-ATTCAATCC 99
|||||||||||||.|||||| |||||.||.
BPUM_1550___p 1 --------------------ATGGAATTAACCCAACTGTCAATTCATTCA 30
BSNT_02688___ 100 ATTGCAAAGCAAGTGAAGGAAATCGCTGAGCTTGAAGTCGAAGTGGCTGT 149
||||||||||||||.||.|||||.||.||||||||.||.||.||.||.||
BPUM_1550___p 31 ATTGCAAAGCAAGTAAAAGAAATTGCAGAGCTTGATGTTGAGGTTGCAGT 80
BSNT_02688___ 150 TGTAGTAGGCGGCGGCAACTTATGGCGCGGAAAAACAGGAAGTGACCTGG 199
|||.||||||||.||.|||.|.||||||||.||.|||||.||||||.|.|
BPUM_1550___p 81 TGTTGTAGGCGGAGGAAACCTTTGGCGCGGTAAGACAGGCAGTGACTTAG 130
BSNT_02688___ 200 GCATGGACCGCGCGACTGCTGACTATATGGGAATGCTGGCGACAGTAATG 249
|.||||||||.|||||.||.|||||.|||||.|||||.||.|||||.|||
BPUM_1550___p 131 GAATGGACCGTGCGACAGCAGACTACATGGGCATGCTAGCAACAGTGATG 180
BSNT_02688___ 250 AATTCGCTTGCTCTTCAAGACAGCTTGGAAACACTCGGAATCCAGTCCAG 299
||||||||.||.||.||.||||||.|.|||||.||.||.||.|||||.||
BPUM_1550___p 181 AATTCGCTCGCGCTACAGGACAGCCTAGAAACGCTTGGCATTCAGTCTAG 230
BSNT_02688___ 300 AGTGCAAACATCCATTGAAATGAGACAAGTTGCTGAACCGTACATAAGAA 349
.||.|||||.||.||.|||||||||||.|||||.|||||.||||||||||
BPUM_1550___p 231 GGTACAAACCTCTATCGAAATGAGACAGGTTGCAGAACCATACATAAGAA 280
BSNT_02688___ 350 GAAAAGCGATACGCCA-CTTAGAGAAAAAACGTGTCGTTATTTTCGCTGC 398
||||||||||.||.|| ||| |||||.|||||||||||.|||||.|||||
BPUM_1550___p 281 GAAAAGCGATCCGTCATCTT-GAGAAGAAACGTGTCGTGATTTTTGCTGC 329
BSNT_02688___ 399 GGGCACAGGAAACCCATATTTCTCAACTGATACGACAGCTGCACTGCGGG 448
.||.||.||.|||||.||||||||.||.|||||.||.||.|||||.||.|
BPUM_1550___p 330 AGGTACTGGTAACCCTTATTTCTCTACAGATACAACGGCAGCACTTCGTG 379
BSNT_02688___ 449 CTGCTGAAATTGAGGCAGACGTTATTTTGATGGCTAAAAATAACGTTGAC 498
|.||.||||||||.|||||.||.|||||.|||||.||||||||.||.|||
BPUM_1550___p 380 CAGCAGAAATTGAAGCAGATGTCATTTTAATGGCGAAAAATAATGTAGAC 429
BSNT_02688___ 499 GGTGTGTATAATGCTGATCCTAGAAAAGAT--GAATCAGCTGTTAAGTAT 546
|||||.||.|.||||||||||.|.|.|||| |.|| ||.||.||.|||
BPUM_1550___p 430 GGTGTCTACAGTGCTGATCCTCGTACAGATGCGGAT--GCAGTAAAATAT 477
BSNT_02688___ 547 GAATCA--CTTTCTTATCTTGACGTTCTTAAAGACGGCCTGGAAGTCATG 594
|| || |||||.||||||||.||.||.|||||.||.||.|.|||.|||
BPUM_1550___p 478 GA--CAAGCTTTCATATCTTGATGTGCTAAAAGAAGGGCTTGCAGTAATG 525
BSNT_02688___ 595 GATTCAACAGCTTCCTCTTTATGCATGGACAATGACATTCCGCTTATCGT 644
|||||.||.||.|||||.|||||.|||||||||||||||||..|.|||||
BPUM_1550___p 526 GATTCTACTGCGTCCTCATTATGTATGGACAATGACATTCCATTAATCGT 575
BSNT_02688___ 645 CTTTTCTATTATGGAAGAAGGAAATATCAAACGTGCCGTTATCGGTGAAT 694
.||.|||||||||||||||||||||||.|||||||||||.|..||.||||
BPUM_1550___p 576 ATTCTCTATTATGGAAGAAGGAAATATTAAACGTGCCGTAAATGGCGAAT 625
BSNT_02688___ 695 CAATCGGAACGATCGTGAGGGGGAAATAA 723
||||.||||||||.|||||||||||||||
BPUM_1550___p 626 CAATTGGAACGATTGTGAGGGGGAAATAA 654
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