Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02682 and BPUM_1545

See DNA alignment / Visit BSNT_02682 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:17
# Commandline: needle
#    -asequence pep-align/BSNT_02682___cheD.1.24716.seq
#    -bsequence pep-align/BPUM_1545___cheD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02682___cheD-BPUM_1545___cheD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02682___cheD-BPUM_1545___cheD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02682___cheD
# 2: BPUM_1545___cheD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:     116/166 (69.9%)
# Similarity:   138/166 (83.1%)
# Gaps:           0/166 ( 0.0%)
# Score: 580.0
# 
#
#=======================================

BSNT_02682___      1 MSTTEAVVIKVGIADVKIARFPDTIRTSGLGSCVGLVLYDKEKQTAGLVH     50
                     |:.....|:|||||||::.:.||.||||||||||||||:|:||:.|||||
BPUM_1545___c      1 MNVQIPAVVKVGIADVQLVKTPDRIRTSGLGSCVGLVLFDQEKKLAGLVH     50

BSNT_02682___     51 VMLPDSTLSKTAELNRAKYADTAVQTTIDMLIEAGCRKFALKAKLAGGSE    100
                     ||||||:|:|.|..|.||||||.|:.|||:|::.|.||.|||||||||:|
BPUM_1545___c     51 VMLPDSSLAKGAVENLAKYADTGVKHTIDLLLKEGARKHALKAKLAGGAE    100

BSNT_02682___    101 MFKFKSTNDLMKIGPRNVLAIKEQLSLFNIPIISEDTGGSSGRTIEFEPK    150
                     |||||||||||:||||||.|:||.|||:.||||||||||::||||||:|.
BPUM_1545___c    101 MFKFKSTNDLMRIGPRNVSAVKEHLSLYRIPIISEDTGGNNGRTIEFDPL    150

BSNT_02682___    151 SCMLHIRTVKQGEKTI    166
                     :..|.|||||||...|
BPUM_1545___c    151 TTELEIRTVKQGIMKI    166


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