Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02681 and BPUM_1544
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:17
# Commandline: needle
# -asequence pep-align/BSNT_02681.1.24716.seq
# -bsequence pep-align/BPUM_1544___cheC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02681-BPUM_1544___cheC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02681-BPUM_1544___cheC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02681
# 2: BPUM_1544___cheC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 73/209 (34.9%)
# Similarity: 88/209 (42.1%)
# Gaps: 111/209 (53.1%)
# Score: 375.0
#
#
#=======================================
BSNT_02681 0 -------------------------------------------------- 0
BPUM_1544___c 1 MSIFNEIKDEQLDVLREVGNIGAGHAASALASLLDRKIDMAVPFVKVLSF 50
BSNT_02681 0 -------------------------------------------------- 0
BPUM_1544___c 51 EELMEFFGGADLPVASIFLRMEGDLSGSIFFIMPFEQAEQFVRELVRDPA 100
BSNT_02681 1 ----------MSSSALHELGNILAGSYLTALADLTKLQLYPSVPEVSLDM 40
|.:|||||||||||||||:||||||||||:||||:|:|||
BPUM_1544___c 101 FDIDTIHEHVMGTSALHELGNILAGSYLSALADLTKLQLHPSVPDVTLDM 150
BSNT_02681 41 FGAVISEGLMELSQVGEHAIVVDTSIFDQSHQQELKAHMFMLPDYDSFEK 90
||||||||||:.|.:|:.|||:||||||..::||||.:||:|||::||||
BPUM_1544___c 151 FGAVISEGLMQFSPLGDQAIVIDTSIFDDQNKQELKGNMFLLPDFESFEK 200
BSNT_02681 91 LFVALGASL 99
||.|||..
BPUM_1544___c 201 LFEALGNL- 208
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