Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02681 and BPUM_1544

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########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:17
# Commandline: needle
#    -asequence pep-align/BSNT_02681.1.24716.seq
#    -bsequence pep-align/BPUM_1544___cheC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02681-BPUM_1544___cheC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02681-BPUM_1544___cheC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02681
# 2: BPUM_1544___cheC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity:      73/209 (34.9%)
# Similarity:    88/209 (42.1%)
# Gaps:         111/209 (53.1%)
# Score: 375.0
# 
#
#=======================================

BSNT_02681         0 --------------------------------------------------      0
                                                                       
BPUM_1544___c      1 MSIFNEIKDEQLDVLREVGNIGAGHAASALASLLDRKIDMAVPFVKVLSF     50

BSNT_02681         0 --------------------------------------------------      0
                                                                       
BPUM_1544___c     51 EELMEFFGGADLPVASIFLRMEGDLSGSIFFIMPFEQAEQFVRELVRDPA    100

BSNT_02681         1 ----------MSSSALHELGNILAGSYLTALADLTKLQLYPSVPEVSLDM     40
                               |.:|||||||||||||||:||||||||||:||||:|:|||
BPUM_1544___c    101 FDIDTIHEHVMGTSALHELGNILAGSYLSALADLTKLQLHPSVPDVTLDM    150

BSNT_02681        41 FGAVISEGLMELSQVGEHAIVVDTSIFDQSHQQELKAHMFMLPDYDSFEK     90
                     ||||||||||:.|.:|:.|||:||||||..::||||.:||:|||::||||
BPUM_1544___c    151 FGAVISEGLMQFSPLGDQAIVIDTSIFDDQNKQELKGNMFLLPDFESFEK    200

BSNT_02681        91 LFVALGASL     99
                     ||.|||.. 
BPUM_1544___c    201 LFEALGNL-    208


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