Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02678 and BPUM_1543

See DNA alignment / Visit BSNT_02678 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:17
# Commandline: needle
#    -asequence pep-align/BSNT_02678___cheW.1.24716.seq
#    -bsequence pep-align/BPUM_1543___cheW.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02678___cheW-BPUM_1543___cheW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02678___cheW-BPUM_1543___cheW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02678___cheW
# 2: BPUM_1543___cheW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:     102/156 (65.4%)
# Similarity:   122/156 (78.2%)
# Gaps:           3/156 ( 1.9%)
# Score: 523.0
# 
#
#=======================================

BSNT_02678___      1 MTAEIKTGEKMIVFMVNGKEYAISVTQVKSIEKWQKPTRVPGVEPYICGV     50
                     |:.:|:||||||||:||.|||||||::||||||||:|||||||.||||||
BPUM_1543___c      1 MSTDIQTGEKMIVFIVNKKEYAISVSEVKSIEKWQQPTRVPGVAPYICGV     50

BSNT_02678___     51 INLRGVVTPVIDLRKRLNLPEYEITDETRIIIIAYRDIEVGWIVDEANDV    100
                     ||||||||||||||.||...:.|||||||:||:.:.||||||||||||||
BPUM_1543___c     51 INLRGVVTPVIDLRVRLGSSDNEITDETRMIIVQFGDIEVGWIVDEANDV    100

BSNT_02678___    101 ITVHESEIESAPEGVQKDTDVSIEQIVKQENRLLNIIDANAVLDKESSQS    150
                     ||||:.|:||:||..:|:....:..|:|.:.||.|||...|||||....:
BPUM_1543___c    101 ITVHQEEVESSPESAEKEGQSWVTGIIKHDQRLFNIIHPGAVLDKSVQDA    150

BSNT_02678___    151 AVPDQA    156
                     .|.   
BPUM_1543___c    151 PVH---    153


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