Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02676 and BPUM_1541
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:17
# Commandline: needle
# -asequence pep-align/BSNT_02676___cheB.1.24716.seq
# -bsequence pep-align/BPUM_1541___cheB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02676___cheB-BPUM_1541___cheB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02676___cheB-BPUM_1541___cheB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02676___cheB
# 2: BPUM_1541___cheB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 227/365 (62.2%)
# Similarity: 290/365 (79.5%)
# Gaps: 16/365 ( 4.4%)
# Score: 1161.0
#
#
#=======================================
BSNT_02676___ 1 MIRVLVVDDSAFMRKMISDFLTEEKQIEVIGTARNGEEALKKIELLKPDV 50
|||||||||||||||:||||||.|::|||:|||||||:|||:|:.|.|||
BPUM_1541___c 1 MIRVLVVDDSAFMRKLISDFLTAEQEIEVVGTARNGEDALKRIKELNPDV 50
BSNT_02676___ 51 ITLDVEMPVMNGTDTLRKIIEIYNLPVIMVSSQTEKGKECTINCLEIGAF 100
:||||||||:|||:.|::|:..::|.||||||||::||:.||:|||:|||
BPUM_1541___c 51 VTLDVEMPVLNGTEALKQILAEHDLAVIMVSSQTKQGKDLTIHCLELGAF 100
BSNT_02676___ 101 DFITKPSGSISLDLYKIKEQLVERVVAAGLSGKRKR-PVSQTVRPEPIVR 149
||:|||||||||||:|::.|:||||:|||||.||.. |||. :
BPUM_1541___c 101 DFVTKPSGSISLDLHKVRGQIVERVLAAGLSRKRTEVPVSS--------K 142
BSNT_02676___ 150 AVVKPEL--SKPKP-----GTGRQIVCIGTSTGGPRALQKVIPKLPKDLN 192
.|:||.: :.|:| |:.|:|:.||||||||||||:|:.|||||:.
BPUM_1541___c 143 PVMKPSIPVATPRPQAVKSGSLRKIISIGTSTGGPRALQRVVTKLPKDIE 192
BSNT_02676___ 193 APVVVVQHMPEGFTASLADRLNHLSDIQVKEAKDGEAALNGCVYIAPGGK 242
||:::|||||.|||||||.||:|||.|.:|||:||:.|.||..||||||.
BPUM_1541___c 193 APILIVQHMPAGFTASLATRLDHLSQISIKEAQDGDIAKNGVAYIAPGGM 242
BSNT_02676___ 243 NISVIKNSEGLQVVLDNHDTPSRHKPSADYLFRSVGKLTDYEKVAVIMTG 292
|:|:.:....|.:.|...||.||||||.:|||.|:..:..|||:||||||
BPUM_1541___c 243 NMSLHEQGASLVIRLSPEDTESRHKPSVNYLFESISHIKGYEKIAVIMTG 292
BSNT_02676___ 293 MGSDGTAGLKDMLTAGNVKAIAESEESCVVYGMPKAAVKAGLIHEIKHVE 342
||||||.|:|.|:.:|:.|.|||.||||||:||||:.:||||.||.:||:
BPUM_1541___c 293 MGSDGTEGVKKMVASGHTKVIAEKEESCVVFGMPKSVIKAGLAHETRHVD 342
BSNT_02676___ 343 DIAASITSCVKKERV 357
|||.:|.|.:||||.
BPUM_1541___c 343 DIAHAIISSMKKERA 357
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