Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02675 and BPUM_1540

See DNA alignment / Visit BSNT_02675 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence pep-align/BSNT_02675___ylxH.1.24716.seq
#    -bsequence pep-align/BPUM_1540___ylxH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02675___ylxH-BPUM_1540___ylxH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02675___ylxH-BPUM_1540___ylxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02675___ylxH
# 2: BPUM_1540___ylxH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     142/301 (47.2%)
# Similarity:   219/301 (72.8%)
# Gaps:           5/301 ( 1.7%)
# Score: 765.5
# 
#
#=======================================

BSNT_02675___      1 MNRYDQAATLRAKMEKRERV--LPMVYSQKAKTLAVISGKGGVGKSNITL     48
                     |.:.|||..||..:::.:.:  .|:..|.:|||:||:||||||||||:||
BPUM_1540___y      1 MMKPDQAEGLRKLVQQNQTITPAPLGISGQAKTIAVMSGKGGVGKSNLTL     50

BSNT_02675___     49 NMALALQDKGKKVLLIDLDIGMGNIDILIGNSSSATIIDVLTDRKPLLQS     98
                     ||||::.:.||:||:||||.||||||||:|.:|:::|:|||..:|....:
BPUM_1540___y     51 NMALSIANAGKRVLVIDLDFGMGNIDILLGKTSTSSILDVLVRKKSFQAA    100

BSNT_02675___     99 LSIGPKGLRYISGGTGLDVMFQLDQRKWTFFANELSHALSQFDYVLFDMG    148
                     ::.|...|.|||||:||:.:|.||:.:|:||..|:...:..||.:.||||
BPUM_1540___y    101 MTQGTNNLYYISGGSGLEQLFSLDKDQWSFFLEEMERMMHDFDCIFFDMG    150

BSNT_02675___    149 AGLSKDQLPFILSAEDILIITTPEPTAILDAYSAVKHLVLTENKLSMKVA    198
                     ||||||||||:|||.:::::||||||:|:|||||:|||.:.:.:.|:::.
BPUM_1540___y    151 AGLSKDQLPFVLSAGEVVVVTTPEPTSIMDAYSAIKHLAIHQFEQSVQII    200

BSNT_02675___    199 VNRCRDQKEGLDAFARLSRTIHMFLDVQVQFAGSVSDDVIVSKAVVEQVP    248
                     ||||:...||.:.:.:|:..:..||..::.|||:|.||..|.|||.||:|
BPUM_1540___y    201 VNRCKTPSEGSETYRKLAGVVTSFLHRKLVFAGAVPDDPAVPKAVAEQIP    250

BSNT_02675___    249 FFIKSPQAKASRSVRILADALFGREETRHKEDKQTFIEKLSSFLMRRA--    296
                     |::|.|.::.|:::::||:.|:.::....:.::.|||:|||||..||.  
BPUM_1540___y    251 FYMKQPHSRLSKTIKMLAETLYQQQIREAQREQHTFIDKLSSFFKRRKVD    300

BSNT_02675___    296 -    296
                      
BPUM_1540___y    301 S    301


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