Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02673 and BPUM_1539
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence pep-align/BSNT_02673___flhF.1.24716.seq
# -bsequence pep-align/BPUM_1539___flhF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02673___flhF-BPUM_1539___flhF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02673___flhF-BPUM_1539___flhF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02673___flhF
# 2: BPUM_1539___flhF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 380
# Identity: 203/380 (53.4%)
# Similarity: 271/380 (71.3%)
# Gaps: 23/380 ( 6.1%)
# Score: 975.5
#
#
#=======================================
BSNT_02673___ 1 MKIKKFTAASMQEAALLIRKELGNEAVILNSKKIKKRKWFGLINKPAVEV 50
||:||.||.|||||.:.||::||.:|||||||.:.|||.|||..:..|||
BPUM_1539___f 1 MKMKKITANSMQEATIQIRQQLGKDAVILNSKTVVKRKLFGLKKQQMVEV 50
BSNT_02673___ 51 IAVLDQDFLEKKTPQKAAEPKQTLKTPVSSPKIEERTYPPQ--------- 91
||||||||.|: ..|..:|...| || .||.|:..:.|:
BPUM_1539___f 51 IAVLDQDFEER--AGKGGQPAPPL--PV-FPKKEQVQHRPKEPSLAPEAV 95
BSNT_02673___ 92 --IPAQQELGDFS---AYQSVLPEPLRKAEKLLQETGIKESTKTNTLKKL 136
:|.|.:..::: .:..:||:||...::.|::.|:.::.:...||.|
BPUM_1539___f 96 KPVPLQAQPLEYARNERHAGILPDPLMAIDQKLKDQGLDDAIRDECLKGL 145
BSNT_02673___ 137 LRFSVEAGGLTEENVVGKLQEILCDTLPAADKWQEPIHSKYIVLFGSTGA 186
| ..|.:.||.:..:|:::|.|.||:.......|.||||||||||||
BPUM_1539___f 146 L----TKGAVKEEQIQKELEQLLTDMLPSHTSDDPMIRSKYIVLFGSTGA 191
BSNT_02673___ 187 GKTTTLAKLAAISMLEKHKKIAFITTDTYRIAAVEQLKTYAELLQAPLEV 236
|||||:|||||.:.::|.|||||||||||||||:||||||||||.|||||
BPUM_1539___f 192 GKTTTIAKLAAKTAIQKQKKIAFITTDTYRIAAIEQLKTYAELLNAPLEV 241
BSNT_02673___ 237 CYTKEEFQQAKELFSEYDHVFVDTAGRNFKDPQYIDELKETIPFESSIQS 286
||::|:|.:|:|.|.||||:||||||||||:..||.||.:.|||:.||||
BPUM_1539___f 242 CYSREDFVKAQETFKEYDHIFVDTAGRNFKEEAYIKELTDIIPFDESIQS 291
BSNT_02673___ 287 FLVLSATAKYEDMKHIVKRFSSVPVNQYIFTKIDETTSLGSVFNILAESK 336
|||:|||:||:|||.:||||..|.::|:||||:|||.::|::|.|:|:|:
BPUM_1539___f 292 FLVMSATSKYQDMKAMVKRFEHVSIDQFIFTKVDETDTMGTIFQIIADSQ 341
BSNT_02673___ 337 IGVGFMTNGQNVPEDIQTVSPLGFVRMLCR 366
||:||:||||||||||...|||...||:.:
BPUM_1539___f 342 IGLGFLTNGQNVPEDILEGSPLELTRMVLQ 371
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