Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02670 and BPUM_1536
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence pep-align/BSNT_02670.1.24716.seq
# -bsequence pep-align/BPUM_1536___fliR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02670-BPUM_1536___fliR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02670-BPUM_1536___fliR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02670
# 2: BPUM_1536___fliR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity: 153/259 (59.1%)
# Similarity: 172/259 (66.4%)
# Gaps: 65/259 (25.1%)
# Score: 773.0
#
#
#=======================================
BSNT_02670 0 -------------------------------------------------- 0
BPUM_1536___f 1 MSIIELFPAFLLVFIRITAFFVTVPLLAHRTIPAVHRVGFSLFLAVISFS 50
BSNT_02670 1 --------------MLLAFKEALVGLCLGLIAYMMIAAVQIAGSFIDFQM 36
|:||.|||:|||.||||||:|::|||||||||||||
BPUM_1536___f 51 TIKEPPALDIDGLYMMLAVKEAMVGLLLGLIAYIMVSAVQIAGSFIDFQM 100
BSNT_02670 37 GFSIANVIDPQTGAQSPLIGQFIYTMALLFMLSVNAHHLLLDGIYYSFQY 86
||:||||||||||||:||:|||.||:.||.||:.||||||||||||||||
BPUM_1536___f 101 GFAIANVIDPQTGAQTPLMGQFFYTVTLLLMLATNAHHLLLDGIYYSFQY 150
BSNT_02670 87 ISVDQAFPNFGDEKFAYFIAKSFNAMFIIAFQMSAPVVASLFLVDLALGI 136
|:|||...|||.|.||||||||||.|||||||:|||||||||||||||||
BPUM_1536___f 151 IAVDQYALNFGSESFAYFIAKSFNQMFIIAFQISAPVVASLFLVDLALGI 200
BSNT_02670 137 VARTVPQLNVFVVGLPLKIAVSFIMLIVCMSVIFVVVRNVFSLTIETMRN 186
|||||||:||||||||:|:.|||||:|:||.|||.||:|.|...:.||||
BPUM_1536___f 201 VARTVPQMNVFVVGLPIKMGVSFIMIIICMGVIFGVVQNTFDTIVLTMRN 250
BSNT_02670 187 LLALVGVS- 194
.|||||.|
BPUM_1536___f 251 FLALVGGSS 259
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