Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02667 and BPUM_1535

See DNA alignment / Visit BSNT_02667 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence pep-align/BSNT_02667___fliQ.1.24716.seq
#    -bsequence pep-align/BPUM_1535___fliQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02667___fliQ-BPUM_1535___fliQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02667___fliQ-BPUM_1535___fliQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02667___fliQ
# 2: BPUM_1535___fliQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      67/89 (75.3%)
# Similarity:    78/89 (87.6%)
# Gaps:           8/89 ( 9.0%)
# Score: 347.0
# 
#
#=======================================

BSNT_02667___      1 --------MAEKAVYVTLMISGPLLAIALLVGLIVSIFQATTQIQEQTLA     42
                             |||::|||.|::||||||:||:||||||:|||||||||||||
BPUM_1535___f      1 MSSEFVITMAERSVYVVLLVSGPLLALALIVGLIVSVFQATTQIQEQTLA     50

BSNT_02667___     43 FIPKIVAVLLALIFFGPWMLSTILSFTTELFSNLNRFAG     81
                     |||||||||:.|:.|||||||||:||||||||||:||||
BPUM_1535___f     51 FIPKIVAVLIGLVVFGPWMLSTIVSFTTELFSNLDRFAG     89


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