Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02666 and BPUM_1534
See
DNA alignment /
Visit
BSNT_02666 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence pep-align/BSNT_02666___fliP.1.24716.seq
# -bsequence pep-align/BPUM_1534___fliP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02666___fliP-BPUM_1534___fliP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02666___fliP-BPUM_1534___fliP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02666___fliP
# 2: BPUM_1534___fliP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity: 195/221 (88.2%)
# Similarity: 212/221 (95.9%)
# Gaps: 0/221 ( 0.0%)
# Score: 978.0
#
#
#=======================================
BSNT_02666___ 1 MNEFINIFSSSDPENVSSTVKLLLLLTVFSVAPGILILMTCFTRIVIVLS 50
|||||::|:||...|:|::|:|||||||||||||||||||||||||||||
BPUM_1534___f 1 MNEFIDLFNSSGAGNISTSVRLLLLLTVFSVAPGILILMTCFTRIVIVLS 50
BSNT_02666___ 51 FVRTSLATQSMPPNQVLIGLALFLTFFIMAPTFSEINKEALTPLMDNKIS 100
||||||||.||||||||:||||||||||||||||||||||||||:::.|:
BPUM_1534___f 51 FVRTSLATNSMPPNQVLVGLALFLTFFIMAPTFSEINKEALTPLLNDDIT 100
BSNT_02666___ 101 LDEAYTKAEEPIKEFMSKHTRQKDLALFMNYAKMDKPESLKDIPLTTMVP 150
|::||.|||.||||||||||||||||||::|||||.|||:||||||.|||
BPUM_1534___f 101 LNQAYEKAEVPIKEFMSKHTRQKDLALFLSYAKMDTPESIKDIPLTAMVP 150
BSNT_02666___ 151 AFAISELKTAFQIGFMIFIPFLIIDMVVASVLMSMGMMMLPPVMISLPFK 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1534___f 151 AFAISELKTAFQIGFMIFIPFLIIDMVVASVLMSMGMMMLPPVMISLPFK 200
BSNT_02666___ 201 ILLFVLVDGWYLIVKSLLQSF 221
|||||||||||||||||||||
BPUM_1534___f 201 ILLFVLVDGWYLIVKSLLQSF 221
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.