Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02655 and BPUM_1526

See DNA alignment / Visit BSNT_02655 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence pep-align/BSNT_02655___flgD.1.24716.seq
#    -bsequence pep-align/BPUM_1526___flgD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02655___flgD-BPUM_1526___flgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02655___flgD-BPUM_1526___flgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02655___flgD
# 2: BPUM_1526___flgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:      76/158 (48.1%)
# Similarity:   103/158 (65.2%)
# Gaps:          28/158 (17.7%)
# Score: 368.0
# 
#
#=======================================

BSNT_02655___      1 ----------MTSISSEYKLPEKTNTVSTNNSSLGKDEFLKILMTQVQNQ     40
                               :|...:..|..:||:|       ||||:|||||:||:|||
BPUM_1526___f      1 MATVDATNRTVTQTDTSSKAEKKTDT-------LGKDQFLKILLTQLQNQ     43

BSNT_02655___     41 DPLNPVDDKEFISQMATFSSLEQMMNLNTTMTQ-------FVENQDPFTT     83
                     ||.||:||:||::|:||||||||..|:|.::|:       ||.:||||||
BPUM_1526___f     44 DPTNPLDDREFVTQLATFSSLEQQTNMNDSITKLNQLMSTFVAHQDPFTT     93

BSNT_02655___     84 YVDWMGKEVSWTDGK-SATDKTGTVSSVKHFKGNYYLVLDDGTEISPANV    132
                     ||.|:|||||   || ...|.:|||.|||:....|:|.|:||.:|||.:|
BPUM_1526___f     94 YVGWIGKEVS---GKLDDKDISGTVKSVKNINNEYFLYLEDGMKISPWDV    140

BSNT_02655___    133 MSVGQSSK    140
                     .:||:.:|
BPUM_1526___f    141 TAVGEKTK    148


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