Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02655 and BPUM_1526

See Amino acid alignment / Visit BSNT_02655 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence dna-align/BSNT_02655___flgD.1.24716.seq
#    -bsequence dna-align/BPUM_1526___flgD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02655___flgD-BPUM_1526___flgD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02655___flgD-BPUM_1526___flgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02655___flgD
# 2: BPUM_1526___flgD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity:     283/481 (58.8%)
# Similarity:   283/481 (58.8%)
# Gaps:          92/481 (19.1%)
# Score: 774.0
# 
#
#=======================================

BSNT_02655___      1 ATGACTTC--TATAAGTTCAGAATATAA-----ACTGCCTGAAAAAACGA     43
                     |||.|..|  ||.|.|.|..|||||.||     ||       |.||||..
BPUM_1526___f      1 ATGGCAACAGTAGATGCTACGAATAGAACAGTCAC-------ACAAACAG     43

BSNT_02655___     44 ACACTGTGTCGACGAACAACAG---------CAGCT----TGGGGAAAGA     80
                     |||||...||    ||.|.|||         |||.|    |.||.|||||
BPUM_1526___f     44 ACACTTCTTC----AAAAGCAGAAAAGAAAACAGATACGCTAGGCAAAGA     89

BSNT_02655___     81 CGAGTTTTTAAAAATATTAATGACTCAAGTTCAAAACCAAGATCCGCTTA    130
                     ..|.||.||.||||||||..|.||.||..||||||||||||||||....|
BPUM_1526___f     90 TCAATTCTTGAAAATATTGCTCACGCAGCTTCAAAACCAAGATCCAACAA    139

BSNT_02655___    131 ACCCGGTTGACGATAAAGAATTTATCAGCCAGATGGCGACTTTTTCAAGC    180
                     ||||..|.||.||....||.|||.|||..|||.|.|||||.||||||...
BPUM_1526___f    140 ACCCACTAGATGACCGTGAGTTTGTCACACAGCTTGCGACATTTTCATCT    189

BSNT_02655___    181 TTGGAGCA-------AATGATG---------------AATCTGAATACGA    208
                     ||.||.||       ||| |||               ||.||||||    
BPUM_1526___f    190 TTAGAACAGCAAACCAAT-ATGAACGATTCTATCACCAAGCTGAAT----    234

BSNT_02655___    209 CA----ATGACTCAATTCGTTGAAAACCAAGATCCGTTTACAACGTATGT    254
                     ||    |||.||..|||.||||...||||||||||||||||.||||||||
BPUM_1526___f    235 CAGCTCATGTCTACATTTGTTGCTCACCAAGATCCGTTTACGACGTATGT    284

BSNT_02655___    255 TGATTGGATGGGAAAAGAAGTATC-------TTGGACTGATGGTAAAAGT    297
                     .|..|||||.||.|||||||||||       ||||| ||||         
BPUM_1526___f    285 AGGGTGGATCGGTAAAGAAGTATCGGGCAAATTGGA-TGAT---------    324

BSNT_02655___    298 GCAACAGATAAAACAGGCACAGTAAGCTCTGTT--AAACATTTTAAAGGA    345
                        |.|||||.|.|||||||.||.|..||||||  |||||   ||||  .
BPUM_1526___f    325 ---AAAGATATATCAGGCACTGTGAAATCTGTTAAAAACA---TAAA--C    366

BSNT_02655___    346 AATTATTATCTCGT---TCTTGATGATGGGACCGAGATCAGTCCTGCGAA    392
                     |||.|.||..||.|   |.|.||.|||||.|...|.|||||.|||..|.|
BPUM_1526___f    367 AATGAATACTTCCTGTATTTAGAAGATGGAATGAAAATCAGCCCTTGGGA    416

BSNT_02655___    393 TGTCATGTCTGTGGGACAATCATCTAAATAA    423
                     |||.|...|.||.|||.||..|.|.||.|||
BPUM_1526___f    417 TGTTACAGCAGTTGGAGAAAAAACGAAGTAA    447


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