Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02652 and BPUM_1525

See DNA alignment / Visit BSNT_02652 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence pep-align/BSNT_02652.1.24716.seq
#    -bsequence pep-align/BPUM_1525___fliK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02652-BPUM_1525___fliK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02652-BPUM_1525___fliK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02652
# 2: BPUM_1525___fliK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 503
# Identity:     181/503 (36.0%)
# Similarity:   272/503 (54.1%)
# Gaps:          76/503 (15.1%)
# Score: 697.5
# 
#
#=======================================

BSNT_02652         1 MKLLELAGPLLQTT---TGSAAKNMKSSQGVFQNWLMSEAGLKELSEQGK     47
                     ||||:: |.|.|::   :|.....:.|:.|:|:. |:|.||.:  ||.|.
BPUM_1525___f      1 MKLLDI-GALQQSSQGLSGPKGSGVNSASGLFKQ-LLSGAGAQ--SESGL     46

BSNT_02652        48 GTPNSEDQLLA--DALKKIGEWLNASPEDQDKQNANLLQTLSKLTGKQLD     95
                     ....:....|:  ||::.|.:|:.:..|..|:   |||..|..|.|:.||
BPUM_1525___f     47 VNAETAGATLSINDAMQIIEKWMKSPEEGIDE---NLLSALQTLQGQTLD     93

BSNT_02652        96 ANALQMLQNLLQAVKSKMSGGTDQLLTDTEKIFSEAKTALSANDSASDIN    145
                     ::.|:.|:.|.|.::|.:.|                              
BPUM_1525___f     94 SSDLESLEELFQKMESSIYG------------------------------    113

BSNT_02652       146 GALKSDTEQSNHENEVSEPAKELIYIQMFISQLVEGNNLTDRGNGNEAHA    195
                            ||:  :...||.:::||.:..|:.||:....|:  .:......
BPUM_1525___f    114 -------EQA--DKPASEHSEQLIQVHFFLYQLLNQQPLS--FDAKIVQD    152

BSNT_02652       196 IYQNGDQFLSALEKKGVSQQIIQDLKQQIFTKAESSSKLYSMTASELKSF    245
                     |...|..|:..|.|.||.:::||.:|:|.|::..|:.||.||:.||||.|
BPUM_1525___f    153 IEAKGQDFIHFLSKNGVDEKLIQQVKEQFFSQQGSAPKLNSMSQSELKHF    202

BSNT_02652       246 QSLMDQMSMLPQKGT-KEWSLAESQLKAFLLSKSSESSQDFGKRVLTPLS    294
                     ..|:|.| |...||: ||..:|..:||. |:|...||:      :.||..
BPUM_1525___f    203 NQLIDHM-MANAKGSDKELKIALGELKE-LVSPRQEST------LATPAK    244

BSNT_02652       295 QSLS-----SKNASDVSGSIQPVDSKSGLQMLFSGYRSIGGVQT-LDLQQ    338
                     .:.|     .|.......:..|...|:....|..|::....:|: ..:||
BPUM_1525___f    245 GAASLEWLIKKEVVKGQSTAAPASEKTITHTLLPGHKQFFQLQSAAPVQQ    294

BSNT_02652       339 MSSDIPNTETK--TVADQVINAWKQMKYTPFGRSTGSFTIRLNPEHLGFV    386
                     ..:    |:.|  ||..|::|.|||||:||||.|:|.||:|||||:|||:
BPUM_1525___f    295 AQT----TDEKPGTVDQQILNTWKQMKFTPFGNSSGRFTVRLNPENLGFI    340

BSNT_02652       387 TIKLTNENGMFQSKIIASSQSAKELLEQHLPQLKQSLPNMAVQIDRFTLP    436
                     ||:||.:|||:.|||.||:|:||||||.|||||||:||||:||:|||.:|
BPUM_1525___f    341 TIQLTKQNGMYASKITASTQAAKELLEHHLPQLKQALPNMSVQVDRFHIP    390

BSNT_02652       437 VQSGDQPIYGQLADEQKQQQ-EGQRQQRQKKQSNDFGDLLDEVSMVEMEE    485
                     :||.:|.::||..:|.|||| :|...|...:|..:|.|:||.:...:.||
BPUM_1525___f    391 LQSNEQSLFGQFNEENKQQQSKGHHFQNPDEQEAEFQDVLDALVGSDEEE    440

BSNT_02652       486 EE-    487
                     || 
BPUM_1525___f    441 EEI    443


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.