Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02652 and BPUM_1525
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence pep-align/BSNT_02652.1.24716.seq
# -bsequence pep-align/BPUM_1525___fliK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02652-BPUM_1525___fliK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02652-BPUM_1525___fliK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02652
# 2: BPUM_1525___fliK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 503
# Identity: 181/503 (36.0%)
# Similarity: 272/503 (54.1%)
# Gaps: 76/503 (15.1%)
# Score: 697.5
#
#
#=======================================
BSNT_02652 1 MKLLELAGPLLQTT---TGSAAKNMKSSQGVFQNWLMSEAGLKELSEQGK 47
||||:: |.|.|:: :|.....:.|:.|:|:. |:|.||.: ||.|.
BPUM_1525___f 1 MKLLDI-GALQQSSQGLSGPKGSGVNSASGLFKQ-LLSGAGAQ--SESGL 46
BSNT_02652 48 GTPNSEDQLLA--DALKKIGEWLNASPEDQDKQNANLLQTLSKLTGKQLD 95
....:....|: ||::.|.:|:.:..|..|: |||..|..|.|:.||
BPUM_1525___f 47 VNAETAGATLSINDAMQIIEKWMKSPEEGIDE---NLLSALQTLQGQTLD 93
BSNT_02652 96 ANALQMLQNLLQAVKSKMSGGTDQLLTDTEKIFSEAKTALSANDSASDIN 145
::.|:.|:.|.|.::|.:.|
BPUM_1525___f 94 SSDLESLEELFQKMESSIYG------------------------------ 113
BSNT_02652 146 GALKSDTEQSNHENEVSEPAKELIYIQMFISQLVEGNNLTDRGNGNEAHA 195
||: :...||.:::||.:..|:.||:....|: .:......
BPUM_1525___f 114 -------EQA--DKPASEHSEQLIQVHFFLYQLLNQQPLS--FDAKIVQD 152
BSNT_02652 196 IYQNGDQFLSALEKKGVSQQIIQDLKQQIFTKAESSSKLYSMTASELKSF 245
|...|..|:..|.|.||.:::||.:|:|.|::..|:.||.||:.||||.|
BPUM_1525___f 153 IEAKGQDFIHFLSKNGVDEKLIQQVKEQFFSQQGSAPKLNSMSQSELKHF 202
BSNT_02652 246 QSLMDQMSMLPQKGT-KEWSLAESQLKAFLLSKSSESSQDFGKRVLTPLS 294
..|:|.| |...||: ||..:|..:||. |:|...||: :.||..
BPUM_1525___f 203 NQLIDHM-MANAKGSDKELKIALGELKE-LVSPRQEST------LATPAK 244
BSNT_02652 295 QSLS-----SKNASDVSGSIQPVDSKSGLQMLFSGYRSIGGVQT-LDLQQ 338
.:.| .|.......:..|...|:....|..|::....:|: ..:||
BPUM_1525___f 245 GAASLEWLIKKEVVKGQSTAAPASEKTITHTLLPGHKQFFQLQSAAPVQQ 294
BSNT_02652 339 MSSDIPNTETK--TVADQVINAWKQMKYTPFGRSTGSFTIRLNPEHLGFV 386
..: |:.| ||..|::|.|||||:||||.|:|.||:|||||:|||:
BPUM_1525___f 295 AQT----TDEKPGTVDQQILNTWKQMKFTPFGNSSGRFTVRLNPENLGFI 340
BSNT_02652 387 TIKLTNENGMFQSKIIASSQSAKELLEQHLPQLKQSLPNMAVQIDRFTLP 436
||:||.:|||:.|||.||:|:||||||.|||||||:||||:||:|||.:|
BPUM_1525___f 341 TIQLTKQNGMYASKITASTQAAKELLEHHLPQLKQALPNMSVQVDRFHIP 390
BSNT_02652 437 VQSGDQPIYGQLADEQKQQQ-EGQRQQRQKKQSNDFGDLLDEVSMVEMEE 485
:||.:|.::||..:|.|||| :|...|...:|..:|.|:||.:...:.||
BPUM_1525___f 391 LQSNEQSLFGQFNEENKQQQSKGHHFQNPDEQEAEFQDVLDALVGSDEEE 440
BSNT_02652 486 EE- 487
||
BPUM_1525___f 441 EEI 443
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