Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02644 and BPUM_1519
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence pep-align/BSNT_02644.1.24716.seq
# -bsequence pep-align/BPUM_1519___fliF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02644-BPUM_1519___fliF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02644-BPUM_1519___fliF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02644
# 2: BPUM_1519___fliF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 539
# Identity: 204/539 (37.8%)
# Similarity: 260/539 (48.2%)
# Gaps: 225/539 (41.7%)
# Score: 1015.5
#
#
#=======================================
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 1 MNRTLMQLRTKTVEFWRNRSKLQKILMIGGVAALAIIITVVSIFASSEKM 50
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 51 VPLFKDLSESEAGQIKQELDGKKIKSELANNGTTILVPEKQADSLKVTLA 100
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 101 SQGLPKTGKIDYSFFANNSGFGLTDNEFDVLKVDATQTELSNLINTIDGI 150
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 151 KDSKVMINLPKDSVFVGEEQSNASASIVLQVERGYTLSPQQVKGLYHLIS 200
BSNT_02644 1 -------------MDQNSTYYD-KSDSDAGSYADSYSSQQGIKSQVEKDI 36
|||:|.||| .|.|| |||....:||..|.::||::
BPUM_1519___f 201 KSVPNLKTENIVIMDQDSNYYDLNSSSD--SYASGMDAQQQKKEEIEKNL 248
BSNT_02644 37 QKHVQSLLGTMMGQDKVVVSVTADIDFTKENRTEDIVEPVDKENMEGIAV 86
|:.:|.||||||||:||.||||.|||||:|.|.||:|||||||||:||||
BPUM_1519___f 249 QRKIQQLLGTMMGQEKVAVSVTTDIDFTEEKRKEDLVEPVDKENMQGIAV 298
BSNT_02644 87 SAEKVSETYQGDGAANGGTAGTGEEDVTNYK-ADGENTESGNYEKNSNKI 135
||||::|||.|:|||.|||||||::|||||: |||.| .||||||:.::|
BPUM_1519___f 299 SAEKIAETYSGNGAAAGGTAGTGDDDVTNYQGADGAN-GSGNYEKSEDRI 347
BSNT_02644 136 NYEVNRIHKEIAESPYKVRDLGIQVMVEPPDAKNTASLSTERQDEIQKIL 185
|||||||||:|.|||||:||:|||.:||||.|.:..||:.||||:|:|||
BPUM_1519___f 348 NYEVNRIHKDIKESPYKIRDVGIQALVEPPTANDVNSLTAERQDDIKKIL 397
BSNT_02644 186 STVVRTSLDKDETQNQNLSDADINNKIVVSVQPFDGKVNLDTNTEK-SSG 234
||::.||:||:.|..|.|:.||::||||:||...||| ..|..|. |:.
BPUM_1519___f 398 STIISTSIDKEYTNGQALTQADLDNKIVLSVSKLDGK--QQTAAENPSNN 445
BSNT_02644 235 IPLWAYIVGGVLIAAIIVLIIMLIRKKRAQEDEFEEYEYEVPQEPINLPD 284
||:|.|||||||:.|||.|||:|:|::|.:|: ||:|:: .:.|:::||
BPUM_1519___f 446 IPIWVYIVGGVLLLAIIALIILLVRRRRKEEE--EEFEFD-ERTPLHVPD 492
BSNT_02644 285 INEEENETAESVRRKQLEKMAKDKPEDFAKLLRSWLAED 323
| :.|.||.|.||:.|||||||||||||||||||||:||
BPUM_1519___f 493 I-DTEPETEEMVRKNQLEKMAKDKPEDFAKLLRSWLSED 530
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