Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02644 and BPUM_1519
See
Amino acid alignment /
Visit
BSNT_02644 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_02644.1.24716.seq
# -bsequence dna-align/BPUM_1519___fliF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02644-BPUM_1519___fliF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02644-BPUM_1519___fliF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02644
# 2: BPUM_1519___fliF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1671
# Identity: 688/1671 (41.2%)
# Similarity: 688/1671 (41.2%)
# Gaps: 777/1671 (46.5%)
# Score: 2119.5
#
#
#=======================================
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 1 ATGAATCGTACTTTAATGCAATTAAGAACAAAAACAGTTGAGTTTTGGCG 50
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 51 AAATCGATCAAAATTACAAAAAATACTTATGATTGGTGGCGTTGCTGCCC 100
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 101 TAGCAATCATTATTACGGTTGTTAGCATCTTTGCTTCTTCTGAAAAAATG 150
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 151 GTTCCATTGTTTAAAGATTTGTCTGAGTCAGAAGCAGGGCAAATCAAACA 200
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 201 GGAACTGGATGGCAAAAAAATTAAATCGGAACTTGCAAACAATGGAACAA 250
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 251 CGATTCTCGTTCCAGAAAAGCAGGCAGACTCTTTAAAAGTAACACTCGCA 300
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 301 TCTCAAGGCCTTCCCAAGACAGGGAAGATTGATTATTCCTTCTTTGCGAA 350
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 351 CAATTCCGGCTTCGGTTTAACAGATAATGAATTTGATGTTCTGAAAGTAG 400
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 401 ACGCAACTCAGACAGAACTGTCCAATCTGATCAACACGATTGATGGAATT 450
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 451 AAAGATTCAAAAGTTATGATTAACTTGCCAAAAGATTCCGTTTTTGTTGG 500
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 501 AGAAGAGCAAAGTAATGCATCAGCATCTATTGTGCTGCAAGTTGAACGTG 550
BSNT_02644 0 -------------------------------------------------- 0
BPUM_1519___f 551 GCTACACGCTCTCGCCGCAGCAAGTAAAAGGCCTTTATCATCTTATTTCA 600
BSNT_02644 1 ---------------------------------------ATGGACCAAAA 11
|||||||||.|
BPUM_1519___f 601 AAAAGTGTACCGAATTTAAAGACAGAGAACATTGTCATTATGGACCAAGA 650
BSNT_02644 12 TTCTACATACTACGACAAATCAGACAGCGATGCAGGGTCCTACGC----- 56
|||.|..|||||.||| |.|.|||||..|.|.|..|||||.||
BPUM_1519___f 651 TTCCAACTACTATGAC---TTAAACAGCAGTTCTGATTCCTATGCAAGTG 697
BSNT_02644 57 ----GGAT----AGTTATTCTTCTCAGCAAGGAATTAAGTCTCAAG---T 95
|||| || ||||| |||..||| ||| |
BPUM_1519___f 698 GAATGGATGCGCAG----------CAGCA--GAAAAAAG----AAGAAAT 731
BSNT_02644 96 TGAAAAAGACATTCAA--AAACATGT--ACAGTCACTGCTGGGTACGATG 141
||||||..||.||||| |||.|| | |||| |||||.||.||.|||
BPUM_1519___f 732 TGAAAAGAACCTTCAAAGAAAAAT-TCAACAG---CTGCTCGGAACAATG 777
BSNT_02644 142 ATGGGCCAAGATAAAGTCGTTGTCTCCGTTACAGCAGACATTGATTTCAC 191
|||||.|||||.|||||||.|||.||.||.|||.|||||||||||||.||
BPUM_1519___f 778 ATGGGTCAAGAAAAAGTCGCTGTATCGGTCACAACAGACATTGATTTTAC 827
BSNT_02644 192 --AAAAGAAAATCGGACAGAAGACATTGTCGAACCTGTGGATAAAGAAAA 239
||.|||||| |.|.|||||||.||||.|||||.||.|||||||||||
BPUM_1519___f 828 TGAAGAGAAAA--GAAAAGAAGACCTTGTAGAACCAGTTGATAAAGAAAA 875
BSNT_02644 240 CATGGAAGGCATTGCAGTCAGCGCTGAAAAGGTATCTGAAACATA-TCAG 288
||||.|||||||.||.|||||.|||||||||.|..|||||||.|| |||
BPUM_1519___f 876 CATGCAAGGCATCGCTGTCAGTGCTGAAAAGATTGCTGAAACTTATTCA- 924
BSNT_02644 289 GGCGACGGTGCAGCCAAC-GGCGGAACTGCCGGAACCGGCGAGGAAGATG 337
||..|.||||||| ||.| ||.|||||.||.|||||.|||||.||.||||
BPUM_1519___f 925 GGAAATGGTGCAG-CAGCTGGTGGAACCGCTGGAACTGGCGATGATGATG 973
BSNT_02644 338 TAACAAATTAT-AAGGCTGACGGTGAAAATACCGAA----AGCGGAAACT 382
|.|||||.||| ||||| |.||.|| .|.|||| ||||||||.|
BPUM_1519___f 974 TCACAAACTATCAAGGC-GCCGATG----GAGCGAATGGTAGCGGAAATT 1018
BSNT_02644 383 ACGAAAAAAACAGCAACAAA----ATCAATTACGAGGTTAACCGAATTCA 428
||| ||||.|||.| |.| |||||.||.||.||.|||||.|||||
BPUM_1519___f 1019 ACG---AAAAGAGCGA-AGATCGTATCAACTATGAAGTCAACCGCATTCA 1064
BSNT_02644 429 TAAAGAAATCGCTGAAAGTCCTTATAAGGTCAGAGATTTAGGGATTCAAG 478
||||||.|||...||.||.||||||||..|.||||||.|.||.|||||||
BPUM_1519___f 1065 TAAAGACATCAAAGAGAGCCCTTATAAAATTAGAGATGTTGGCATTCAAG 1114
BSNT_02644 479 TAATGGTAGAGCCGCCTGATGCCAAA-------AACACAGCGTCGCTATC 521
.|.||||.||.||.|| .|.|.|||| ||| ||..||.|
BPUM_1519___f 1115 CATTGGTCGAACCACC-AACGGCAAACGATGTGAAC------TCTTTAAC 1157
BSNT_02644 522 AACTGAAAGACAGGATGAAATACAAAAAATCCTTTCAACTGTAGTCAGAA 571
|.|||||.|.||.|||||.||..||||.||.||||||||..|..|.||.|
BPUM_1519___f 1158 AGCTGAACGGCAAGATGATATTAAAAAGATTCTTTCAACGATCATTAGCA 1207
BSNT_02644 572 CATCTTTGGATAAAGATGAAACGCAAA---ACCAGAATTTATCTGATGCT 618
|.||..|.|||||||| |.||.|||| .|.||...|.| ||.|.||.
BPUM_1519___f 1208 CGTCAATTGATAAAGA--ATACACAAATGGTCAAGCGCTCA-CTCAAGCA 1254
BSNT_02644 619 GATATCAATAATAAGATTGTTGTCTCCGT-TCAGCCATTCGACGGCAAAG 667
||..|..||||.||.||||||.|.||.|| ||| ..|||.|||||.|||
BPUM_1519___f 1255 GACTTAGATAACAAAATTGTTTTATCTGTATCA-AAATTAGACGGTAAA- 1302
BSNT_02644 668 TCAATTTGGATACAAATA----CGGAAAAATCCTCA---GGTATCCCGCT 710
|| .||||.| |.|||||..|.||| ..|||.||..|
BPUM_1519___f 1303 -CA--------GCAAACAGCAGCAGAAAACCCATCAAACAATATTCCAAT 1343
BSNT_02644 711 GTGGGCATATATTGTAGGCGGTGTTTTAATCGCAGCGATCATTGTTCTGA 760
.||||..|||||||||||||||||..||.|....||.||.||.|.|||.|
BPUM_1519___f 1344 CTGGGTTTATATTGTAGGCGGTGTGCTACTACTTGCAATTATCGCTCTTA 1393
BSNT_02644 761 TCATTATGCTTATCAGAA-----AGAAACGGGCGCAAGAGGATGAATTTG 805
|.|||.|.|||.|..|.| |||||.| |||||||.|||
BPUM_1519___f 1394 TTATTCTTCTTGTGCGTAGACGCAGAAAAG-----AAGAGGAAGAA---- 1434
BSNT_02644 806 AGGAATATGAGTATGAGGTTCCTCAAGA-ACCAATCAATTTGCCTGATAT 854
||.|.|||||.|||.|..|.| | ||||.||.||.|.||||||||
BPUM_1519___f 1435 --GAGTTTGAGTTTGATGAACGT----ACACCACTCCATGTTCCTGATAT 1478
BSNT_02644 855 CAACGAAGA-GGAAAATGAAACAGCGGAATCAGTCAGACGAAAA--CAGC 901
|.|| | .|||...|||||||.||||...|| ||.||||| ||||
BPUM_1519___f 1479 CGAC----ACTGAACCAGAAACAGAGGAAATGGT--GAGGAAAAATCAGC 1522
BSNT_02644 902 TTGAAAAGATGGCGAAAGACAAGCCGGAAGATTTTGCAAAACTGCTGAGA 951
||||.||.|||||.|||||.||.||.|||||.|||||.|||.||||..|.
BPUM_1519___f 1523 TTGAGAAAATGGCAAAAGATAAACCAGAAGACTTTGCTAAATTGCTACGC 1572
BSNT_02644 952 AGCTGGCTGGCCGAGGATTAG 972
|||||||||.|||||||||||
BPUM_1519___f 1573 AGCTGGCTGTCCGAGGATTAG 1593
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.