Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02642 and BPUM_1518

See DNA alignment / Visit BSNT_02642 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:14
# Commandline: needle
#    -asequence pep-align/BSNT_02642___fliE.1.24716.seq
#    -bsequence pep-align/BPUM_1518___fliE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02642___fliE-BPUM_1518___fliE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02642___fliE-BPUM_1518___fliE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02642___fliE
# 2: BPUM_1518___fliE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      71/106 (67.0%)
# Similarity:    85/106 (80.2%)
# Gaps:           1/106 ( 0.9%)
# Score: 344.0
# 
#
#=======================================

BSNT_02642___      1 MINAISPFQVQNTQNTQNATNQVNNSQKTDSSNQTSFSELLKNSISSLNE     50
                     |:|||||||:|..|.....|| .::.......:||:||::|||||.:||:
BPUM_1518___f      1 MVNAISPFQLQAAQQASELTN-ASSVHAAAPKSQTNFSDVLKNSIEALNQ     49

BSNT_02642___     51 SQVASDNMTNALAAGKDVNLDEVMIAAQKASISLTAATEFRNKAVEAYQE    100
                     ||:.||..|||||.||||||||||||:||||::|||||||||||||||||
BPUM_1518___f     50 SQLKSDQYTNALAQGKDVNLDEVMIASQKASVTLTAATEFRNKAVEAYQE     99

BSNT_02642___    101 IMRMQM    106
                     ||||||
BPUM_1518___f    100 IMRMQM    105


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