Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02630 and BPUM_1509

See DNA alignment / Visit BSNT_02630 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence pep-align/BSNT_02630___smf.1.24716.seq
#    -bsequence pep-align/BPUM_1509___smf.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02630___smf-BPUM_1509___smf.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02630___smf-BPUM_1509___smf.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02630___smf
# 2: BPUM_1509___smf
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     158/305 (51.8%)
# Similarity:   216/305 (70.8%)
# Gaps:          13/305 ( 4.3%)
# Score: 839.5
# 
#
#=======================================

BSNT_02630___      1 MDQAAACLTICRINQLLSPSLLLKWWKADPSMSLTSPV--------LQTV     42
                     |...:..:...|:..|:|||||.||||.||.:.:....        |||:
BPUM_1509___s      1 MYNVSERMIFHRLKGLISPSLLTKWWKVDPELYINEETHHFKQDRSLQTI     50

BSNT_02630___     43 TRDQIKAAALKNEIEQFYPKLPRVLAAYREQGINTIPISSKQYPFWLKSI     92
                     ...::|.|.     |:.:|....::.||.:|.|:.|||:|..||..||.|
BPUM_1509___s     51 DFTRLKQAE-----EKEFPIFQHIVQAYLKQNIHMIPITSPMYPNTLKHI     95

BSNT_02630___     93 YDPPAVLFAKGDMTLLSKGRKIGIVGTRNPTAYGKQVVNHLTKEICRKGW    142
                     ||||.|||.||:::.|::.:.:|:||||.|::||:..|..:..|:.::.|
BPUM_1509___s     96 YDPPPVLFLKGNISYLNEEKSLGVVGTRVPSSYGEACVKKIVGELVKENW    145

BSNT_02630___    143 VIVSGLASGIDGMSHAASIKAKGRTIGVIAGGFQHIYPRENLQLADHMAK    192
                     :||||||.||||::|...|:.||:|||:|||||||:||:|::|:|::|.:
BPUM_1509___s    146 MIVSGLAKGIDGLAHKECIRNKGKTIGIIAGGFQHLYPKEHVQMAEYMGE    195

BSNT_02630___    193 HHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITAYQ    242
                     ||:|||||||..||:|||||:|||:||.|:.|.||:|.||||||||||||
BPUM_1509___s    196 HHLLLSEHPPYVKPEKWHFPLRNRLISALTSGTIVIQCKEKSGSLITAYQ    245

BSNT_02630___    243 ALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQ    292
                     |||||:|||||.||:|||.:.||.:|||||||.:.|.:||.||...|:||
BPUM_1509___s    246 ALEQGKEVFAVAGSIFDPNSTGPARLIQQGAKLVHSTKDILEEFSFRSVQ    295

BSNT_02630___    293 YTEPF    297
                     |||..
BPUM_1509___s    296 YTELL    300


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