Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02625 and BPUM_1504
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence pep-align/BSNT_02625___rnhB.1.24716.seq
# -bsequence pep-align/BPUM_1504___rnhB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02625___rnhB-BPUM_1504___rnhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02625___rnhB-BPUM_1504___rnhB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02625___rnhB
# 2: BPUM_1504___rnhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity: 149/258 (57.8%)
# Similarity: 191/258 (74.0%)
# Gaps: 7/258 ( 2.7%)
# Score: 740.5
#
#
#=======================================
BSNT_02625___ 1 MNTLTVKDIKDRLQEVKDAQD-PFIAQ-CENDPRKSVQTLVEQWLKKQAK 48
..|||.||:.:: |.:|| .:|.: .::|.|||.|.|:|:|.|::.|
BPUM_1504___r 1 --MYTVKQIKELIE--KHSQDESYIHELVKDDKRKSAQKLIEKWHKEREK 46
BSNT_02625___ 49 EKALKEQWVNMTSYERLARNKGFRLIAGVDEVGRGPLAGPVVASAVILPE 98
::.|...|..|..:|..|:.:|:..|||:||.|||||||||||:||||.:
BPUM_1504___r 47 QQQLHAAWHEMLQFENNAKAQGYTCIAGIDEAGRGPLAGPVVAAAVILKD 96
BSNT_02625___ 99 ECEILGLTDSKKLSEKKREEYYELIMKEALAVGIGIVEATVIDEINIYEA 148
:..:|||.|||:||||||..||:||.||||.:|||||:|..|||||||||
BPUM_1504___r 97 DTVLLGLNDSKQLSEKKRLAYYDLIQKEALDIGIGIVDAATIDEINIYEA 146
BSNT_02625___ 149 SKMAMVKAIQDLSGTPDYLLVDAMTLPLDTAQASIIKGDAKSVSIAAGAC 198
|::|||:|::.|:.||||||:|||||||...|.:||||||||.|||||||
BPUM_1504___r 147 SRLAMVRAVEQLAHTPDYLLIDAMTLPLPIHQENIIKGDAKSASIAAGAC 196
BSNT_02625___ 199 IAKVTRDRMMSAYAETYPMYGFEKNKGYGTKEHLEALAAYGPTELHRKTF 248
|||||||:||..|...||.|.|||:|||||||||.|:..:|...:||.:|
BPUM_1504___r 197 IAKVTRDQMMEEYGRQYPEYQFEKHKGYGTKEHLAAIQTHGAAPIHRLSF 246
BSNT_02625___ 249 APVQSFR- 255
|||:|..
BPUM_1504___r 247 APVKSVIS 254
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