Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02625 and BPUM_1504

See DNA alignment / Visit BSNT_02625 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_02625___rnhB.1.24716.seq
#    -bsequence pep-align/BPUM_1504___rnhB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02625___rnhB-BPUM_1504___rnhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02625___rnhB-BPUM_1504___rnhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02625___rnhB
# 2: BPUM_1504___rnhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     149/258 (57.8%)
# Similarity:   191/258 (74.0%)
# Gaps:           7/258 ( 2.7%)
# Score: 740.5
# 
#
#=======================================

BSNT_02625___      1 MNTLTVKDIKDRLQEVKDAQD-PFIAQ-CENDPRKSVQTLVEQWLKKQAK     48
                       ..|||.||:.::  |.:|| .:|.: .::|.|||.|.|:|:|.|::.|
BPUM_1504___r      1 --MYTVKQIKELIE--KHSQDESYIHELVKDDKRKSAQKLIEKWHKEREK     46

BSNT_02625___     49 EKALKEQWVNMTSYERLARNKGFRLIAGVDEVGRGPLAGPVVASAVILPE     98
                     ::.|...|..|..:|..|:.:|:..|||:||.|||||||||||:||||.:
BPUM_1504___r     47 QQQLHAAWHEMLQFENNAKAQGYTCIAGIDEAGRGPLAGPVVAAAVILKD     96

BSNT_02625___     99 ECEILGLTDSKKLSEKKREEYYELIMKEALAVGIGIVEATVIDEINIYEA    148
                     :..:|||.|||:||||||..||:||.||||.:|||||:|..|||||||||
BPUM_1504___r     97 DTVLLGLNDSKQLSEKKRLAYYDLIQKEALDIGIGIVDAATIDEINIYEA    146

BSNT_02625___    149 SKMAMVKAIQDLSGTPDYLLVDAMTLPLDTAQASIIKGDAKSVSIAAGAC    198
                     |::|||:|::.|:.||||||:|||||||...|.:||||||||.|||||||
BPUM_1504___r    147 SRLAMVRAVEQLAHTPDYLLIDAMTLPLPIHQENIIKGDAKSASIAAGAC    196

BSNT_02625___    199 IAKVTRDRMMSAYAETYPMYGFEKNKGYGTKEHLEALAAYGPTELHRKTF    248
                     |||||||:||..|...||.|.|||:|||||||||.|:..:|...:||.:|
BPUM_1504___r    197 IAKVTRDQMMEEYGRQYPEYQFEKHKGYGTKEHLAAIQTHGAAPIHRLSF    246

BSNT_02625___    249 APVQSFR-    255
                     |||:|.. 
BPUM_1504___r    247 APVKSVIS    254


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