Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02623 and BPUM_1503

See DNA alignment / Visit BSNT_02623 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_02623___rbgA.1.24716.seq
#    -bsequence pep-align/BPUM_1503___rbgA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02623___rbgA-BPUM_1503___rbgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02623___rbgA-BPUM_1503___rbgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02623___rbgA
# 2: BPUM_1503___rbgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     245/282 (86.9%)
# Similarity:   266/282 (94.3%)
# Gaps:           0/282 ( 0.0%)
# Score: 1274.0
# 
#
#=======================================

BSNT_02623___      1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKN     50
                     |||||||||||||||||||||||||||:||.||||||||||||||:||:|
BPUM_1503___r      1 MTIQWFPGHMAKARREVTEKLKLIDIVFELTDARIPMSSRNPMIEEILQN     50

BSNT_02623___     51 KPRIMLLNKADKADAAVTQRWKEHFEKQGIRSLSINSVNGQGLNQIVPAS    100
                     ||:|||||||||||..||:.|:.|||:||:|||:||||:|||||||:..|
BPUM_1503___r     51 KPKIMLLNKADKADPRVTKEWQAHFEQQGVRSLAINSVDGQGLNQIITTS    100

BSNT_02623___    101 KEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGD    150
                     ||||:||||||:||||||||||||||||||||||||||||||||||||||
BPUM_1503___r    101 KEILKEKFDRMKAKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGD    150

BSNT_02623___    151 RPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGAIKDSII    200
                     ||||||||||||||||:||||||||||||||||.||||||||||||||||
BPUM_1503___r    151 RPGITTSQQWVKVGKEMELLDTPGILWPKFEDEKVGLRLAVTGAIKDSII    200

BSNT_02623___    201 NLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMS    250
                     |||||||:|||||||:||||||:||.|.:||||.||||||||.|||||||
BPUM_1503___r    201 NLQDVAVYGLRFLEENYPERLKKRYDLTDIPEDTAELFDAIGTKRGCLMS    250

BSNT_02623___    251 GGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM    282
                     ||.||||||||:|||||||||||.|:||:|..
BPUM_1503___r    251 GGFINYDKTTEIIIRDIRTEKFGPLTFEKPES    282


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