Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02620 and BPUM_1502

See DNA alignment / Visit BSNT_02620 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_02620___rplS.1.24716.seq
#    -bsequence pep-align/BPUM_1502___rplS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02620___rplS-BPUM_1502___rplS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02620___rplS-BPUM_1502___rplS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02620___rplS
# 2: BPUM_1502___rplS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 115
# Identity:     110/115 (95.7%)
# Similarity:   113/115 (98.3%)
# Gaps:           0/115 ( 0.0%)
# Score: 553.0
# 
#
#=======================================

BSNT_02620___      1 MQKLIEDITKEQLRTDLPAFRPGDTLRVHVKVVEGNRERIQIFEGVVIKR     50
                     ||:|||:||||||||||||||||||||||||||||.||||||||||||||
BPUM_1502___r      1 MQQLIEEITKEQLRTDLPAFRPGDTLRVHVKVVEGTRERIQIFEGVVIKR     50

BSNT_02620___     51 RGGGISETFTVRKISYGVGVERTFPVHTPKIAKIEVVRYGKVRRAKLYYL    100
                     ||||||||||||||||||||||||||||||||.|||||:|||||||||||
BPUM_1502___r     51 RGGGISETFTVRKISYGVGVERTFPVHTPKIANIEVVRHGKVRRAKLYYL    100

BSNT_02620___    101 RELRGKAARIKEIRR    115
                     |||||||||||||||
BPUM_1502___r    101 RELRGKAARIKEIRR    115


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