Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02619 and BPUM_1501

See DNA alignment / Visit BSNT_02619 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_02619___trmD.1.24716.seq
#    -bsequence pep-align/BPUM_1501___trmD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02619___trmD-BPUM_1501___trmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02619___trmD-BPUM_1501___trmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02619___trmD
# 2: BPUM_1501___trmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     206/246 (83.7%)
# Similarity:   224/246 (91.1%)
# Gaps:           5/246 ( 2.0%)
# Score: 1085.5
# 
#
#=======================================

BSNT_02619___      1 MKIDFLTLFPEMFEGVLGSSILQKAQEKDAVQFQVVNFREYSDNKHNTVD     50
                     |||||||||||||||||.||||:|||||:||.|.|||||||||:||.|||
BPUM_1501___t      1 MKIDFLTLFPEMFEGVLHSSILKKAQEKEAVSFNVVNFREYSDHKHKTVD     50

BSNT_02619___     51 DYPYGGGAGMVLKPQPVFDAVEDLTSKAAAAPRIILVCPQGERFTQKKAE    100
                     |||||||||||||.|||||||||||:||:..||||||||||||:||||||
BPUM_1501___t     51 DYPYGGGAGMVLKAQPVFDAVEDLTNKASKKPRIILVCPQGERYTQKKAE    100

BSNT_02619___    101 QLAKEEHLLFICGHYEGYDERIREHLVTDEISIGDFVLTGGELPAMMIAD    150
                     :|||||||:|||||||||||||||||||||||||||||||||||||||||
BPUM_1501___t    101 ELAKEEHLMFICGHYEGYDERIREHLVTDEISIGDFVLTGGELPAMMIAD    150

BSNT_02619___    151 SVVRLLPGVLGKEASHIEDSFSTGLLEHPHYTRPADYKGLKVPETLLSGN    200
                     |||||||.|||||||||||||||||||||||||||||||||||:.|||||
BPUM_1501___t    151 SVVRLLPHVLGKEASHIEDSFSTGLLEHPHYTRPADYKGLKVPDVLLSGN    200

BSNT_02619___    201 HAKIEEWRNKESIRRTYLRRPDLLKD-YPLTEQQRKWISEWEKE--    243
                     ||||||||.|||::|||.|||||:.. ..|||::::|:  |:..  
BPUM_1501___t    201 HAKIEEWRRKESLKRTYTRRPDLIDSCKTLTEEEKRWL--WQLHND    244


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