Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02608 and BPUM_1492

See DNA alignment / Visit BSNT_02608 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence pep-align/BSNT_02608___rnc.1.24716.seq
#    -bsequence pep-align/BPUM_1492___rnc.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02608___rnc-BPUM_1492___rnc.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02608___rnc-BPUM_1492___rnc.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02608___rnc
# 2: BPUM_1492___rnc
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     223/249 (89.6%)
# Similarity:   235/249 (94.4%)
# Gaps:           2/249 ( 0.8%)
# Score: 1141.5
# 
#
#=======================================

BSNT_02608___      1 MSKHSHYKDKKKFYKKVEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEH     50
                     |.|  .||||:|..||:|||:|||:|||||||||||||||||||||||||
BPUM_1492___r      1 MPK--QYKDKQKQSKKLEQFREFQQRISVHFQNEKLLYQAFTHSSYVNEH     48

BSNT_02608___     51 RKKPYEDNERLEFLGDAVLELTISRFLFAKYPAMSEGDLTKLRAAIVCEP    100
                     ||||||||||||||||||||||||:|||||||||||||||||||||||||
BPUM_1492___r     49 RKKPYEDNERLEFLGDAVLELTISQFLFAKYPAMSEGDLTKLRAAIVCEP     98

BSNT_02608___    101 SLVSLAHELSFGDLVLLGKGEEMTGGRKRPALLADVFEAFIGALYLDQGL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1492___r     99 SLVSLAHELSFGDLVLLGKGEEMTGGRKRPALLADVFEAFIGALYLDQGL    148

BSNT_02608___    151 EPVESFLKVYVFPKINDGAFSHVMDFKSQLQEYVQRDGKGSLEYKISNEK    200
                     ||||.||:.||:||||||||||||||||||||:|||||||.|||:|.:||
BPUM_1492___r    149 EPVERFLEAYVYPKINDGAFSHVMDFKSQLQEFVQRDGKGVLEYRILHEK    198

BSNT_02608___    201 GPAHNREFEAIVSLKGEPLGVGNGRSKKEAEQHAAQEALAKLQKHHTKQ    249
                     ||||||||||.|||:||.||:|||||||||||||||||||||||||..|
BPUM_1492___r    199 GPAHNREFEANVSLRGEVLGIGNGRSKKEAEQHAAQEALAKLQKHHMNQ    247


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