Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02605 and BPUM_1489
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence pep-align/BSNT_02605___fabD.1.24716.seq
# -bsequence pep-align/BPUM_1489___fabD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02605___fabD-BPUM_1489___fabD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02605___fabD-BPUM_1489___fabD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02605___fabD
# 2: BPUM_1489___fabD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity: 239/317 (75.4%)
# Similarity: 271/317 (85.5%)
# Gaps: 3/317 ( 0.9%)
# Score: 1175.0
#
#
#=======================================
BSNT_02605___ 1 MSKIAFLFPGQGSQFIGMGKELYEQVPAAKRLFDEADETLETKLSSLIFE 50
|:||||||||||||.|||||:|::|...:|.:|:|||:||...|||:|||
BPUM_1489___f 1 MTKIAFLFPGQGSQKIGMGKDLFDQEAVSKAVFEEADKTLGFDLSSMIFE 50
BSNT_02605___ 51 GAAEELTLTYNAQPALLTTSIAVLEKFKESGITPDFTAGHSLGEYSALVA 100
|.||||||||||||||||||||:|:||:||||..|:.||||||||:||||
BPUM_1489___f 51 GEAEELTLTYNAQPALLTTSIAILKKFEESGIKADYAAGHSLGEYTALVA 100
BSNT_02605___ 101 AGALSFKDAVYTVRKRGEFMNEAVPAGEGAMAAILGMDAEALKQVTDKVT 150
||||||:||||.|.||||.|||||||||||||||||:|..||.:||.:||
BPUM_1489___f 101 AGALSFQDAVYAVSKRGELMNEAVPAGEGAMAAILGLDQTALLEVTKEVT 150
BSNT_02605___ 151 EEGNLVQLANLNCPGQIVISGTAKGVELASELAKENGAKRAIPLEVSGPF 200
|.|:||:||||||||||||||||||||||||.|||.||||||.|||||||
BPUM_1489___f 151 ESGHLVELANLNCPGQIVISGTAKGVELASEKAKEKGAKRAIALEVSGPF 200
BSNT_02605___ 201 HSELMKPAAEKLKEVLDACDIKDADIPVISNVSADVMTEKADIKEKLIEQ 250
||.||||||||..:||...||.||..||||||:||::|.:..|:.|||||
BPUM_1489___f 201 HSALMKPAAEKFTDVLSKLDISDAKTPVISNVTADIVTSRDAIETKLIEQ 250
BSNT_02605___ 251 LYSPVRFEESINKLIAEGVTTFIEIGPGKVLSGLVKKVNRRLKTIAVSDP 300
||||||||||:.:||..|||||||||||||||||||||||||.||:|||.
BPUM_1489___f 251 LYSPVRFEESVERLIDLGVTTFIEIGPGKVLSGLVKKVNRRLTTISVSDQ 300
BSNT_02605___ 301 ETIELAIQTLKEENDNA 317
||||.||:|||.::
BPUM_1489___f 301 ETIEAAIETLKGDS--- 314
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