Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02605 and BPUM_1489

See DNA alignment / Visit BSNT_02605 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_02605___fabD.1.24716.seq
#    -bsequence pep-align/BPUM_1489___fabD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02605___fabD-BPUM_1489___fabD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02605___fabD-BPUM_1489___fabD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02605___fabD
# 2: BPUM_1489___fabD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity:     239/317 (75.4%)
# Similarity:   271/317 (85.5%)
# Gaps:           3/317 ( 0.9%)
# Score: 1175.0
# 
#
#=======================================

BSNT_02605___      1 MSKIAFLFPGQGSQFIGMGKELYEQVPAAKRLFDEADETLETKLSSLIFE     50
                     |:||||||||||||.|||||:|::|...:|.:|:|||:||...|||:|||
BPUM_1489___f      1 MTKIAFLFPGQGSQKIGMGKDLFDQEAVSKAVFEEADKTLGFDLSSMIFE     50

BSNT_02605___     51 GAAEELTLTYNAQPALLTTSIAVLEKFKESGITPDFTAGHSLGEYSALVA    100
                     |.||||||||||||||||||||:|:||:||||..|:.||||||||:||||
BPUM_1489___f     51 GEAEELTLTYNAQPALLTTSIAILKKFEESGIKADYAAGHSLGEYTALVA    100

BSNT_02605___    101 AGALSFKDAVYTVRKRGEFMNEAVPAGEGAMAAILGMDAEALKQVTDKVT    150
                     ||||||:||||.|.||||.|||||||||||||||||:|..||.:||.:||
BPUM_1489___f    101 AGALSFQDAVYAVSKRGELMNEAVPAGEGAMAAILGLDQTALLEVTKEVT    150

BSNT_02605___    151 EEGNLVQLANLNCPGQIVISGTAKGVELASELAKENGAKRAIPLEVSGPF    200
                     |.|:||:||||||||||||||||||||||||.|||.||||||.|||||||
BPUM_1489___f    151 ESGHLVELANLNCPGQIVISGTAKGVELASEKAKEKGAKRAIALEVSGPF    200

BSNT_02605___    201 HSELMKPAAEKLKEVLDACDIKDADIPVISNVSADVMTEKADIKEKLIEQ    250
                     ||.||||||||..:||...||.||..||||||:||::|.:..|:.|||||
BPUM_1489___f    201 HSALMKPAAEKFTDVLSKLDISDAKTPVISNVTADIVTSRDAIETKLIEQ    250

BSNT_02605___    251 LYSPVRFEESINKLIAEGVTTFIEIGPGKVLSGLVKKVNRRLKTIAVSDP    300
                     ||||||||||:.:||..|||||||||||||||||||||||||.||:|||.
BPUM_1489___f    251 LYSPVRFEESVERLIDLGVTTFIEIGPGKVLSGLVKKVNRRLTTISVSDQ    300

BSNT_02605___    301 ETIELAIQTLKEENDNA    317
                     ||||.||:|||.::   
BPUM_1489___f    301 ETIEAAIETLKGDS---    314


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