Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02604 and BPUM_1488

See DNA alignment / Visit BSNT_02604 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_02604___plsX.1.24716.seq
#    -bsequence pep-align/BPUM_1488___plsX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02604___plsX-BPUM_1488___plsX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02604___plsX-BPUM_1488___plsX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02604___plsX
# 2: BPUM_1488___plsX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     241/334 (72.2%)
# Similarity:   299/334 (89.5%)
# Gaps:           3/334 ( 0.9%)
# Score: 1262.0
# 
#
#=======================================

BSNT_02604___      1 MRIAVDAMGGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTTS     50
                     ||||||||||||||||:||||.|.:.||.|:.||||||::.|:.:: |.:
BPUM_1488___p      1 MRIAVDAMGGDHAPKAIIDGVQKSLTAFSDIEITLVGDESKIKPYI-TNN     49

BSNT_02604___     51 DRITVLHADEVIEPTDEPVRAVRRKKNSSMVLMAQEVAENRADACISAGN    100
                     :|||:|.|.|||||||||||||||||:||||.|||||:|.||||||||||
BPUM_1488___p     50 ERITILDAKEVIEPTDEPVRAVRRKKDSSMVKMAQEVSEGRADACISAGN     99

BSNT_02604___    101 TGALMTAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEH    150
                     |||||||||||||||.|||||||||||||:.|.|||||||||||||||||
BPUM_1488___p    100 TGALMTAGLFIVGRIDGIDRPALAPTLPTLDGSGFLLLDVGANVDAKPEH    149

BSNT_02604___    151 LVQYAIMGSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETA    200
                     |||||:|||:|:::|...::||||||||||||||||:|||:||::|| .:
BPUM_1488___p    150 LVQYAMMGSIYAERVFPKSNPRVGLLNVGTEDKKGNDLTKKTFELLK-AS    198

BSNT_02604___    201 NINFIGNVEARDLLDDVADVVVTDGFTGNVTLKTLEGSALSIFKMMRDVM    250
                     ::||:||||:||||:.|||||||||||||:.|||:||:|||:|||:::.:
BPUM_1488___p    199 DLNFVGNVESRDLLEGVADVVVTDGFTGNIALKTIEGTALSVFKMLKETL    248

BSNT_02604___    251 TSTLTSKLAAAVLKPKLKEMKMNMEYSNYGGASLFGLKAPVIKAHGSSDS    300
                     ||:.|:|:||.::||||.:||..|:||.||||:||||||||||||||||.
BPUM_1488___p    249 TSSFTAKIAAGMMKPKLMQMKSKMDYSEYGGAALFGLKAPVIKAHGSSDE    298

BSNT_02604___    301 NAVFHAIRQAREMVSQNVAALIQEEVKEEKTDE-    333
                     ||:||||||||::|.::|:|:|.:||::|.|:| 
BPUM_1488___p    299 NAIFHAIRQARDIVEKDVSAIIHQEVQKETTNES    332


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