Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02604 and BPUM_1488
See
Amino acid alignment /
Visit
BSNT_02604 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence dna-align/BSNT_02604___plsX.1.24716.seq
# -bsequence dna-align/BPUM_1488___plsX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02604___plsX-BPUM_1488___plsX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02604___plsX-BPUM_1488___plsX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02604___plsX
# 2: BPUM_1488___plsX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1040
# Identity: 724/1040 (69.6%)
# Similarity: 724/1040 (69.6%)
# Gaps: 79/1040 ( 7.6%)
# Score: 2395.5
#
#
#=======================================
BSNT_02604___ 1 ATGAGAATAGCTGTAGATGCAATGGGAGGAGACCACGCTCCCAAAGCTGT 50
||||||||.||.||.|||||||||||.||||||||.||.||.|||||..|
BPUM_1488___p 1 ATGAGAATTGCAGTCGATGCAATGGGGGGAGACCATGCCCCTAAAGCCAT 50
BSNT_02604___ 51 TATTGACGGAGT-TATAAAAGGTATAGAGGCATTTGATGATCTCCATATC 99
|||||||||.|| .|.|||||.| ||..|||||||...|||.|..|.||.
BPUM_1488___p 51 TATTGACGGTGTGCAAAAAAGCT-TAACGGCATTTTCAGATATTGAGATT 99
BSNT_02604___ 100 ACACTTGTCGGTGACAAAACAACGATAGAATCA---CAT--TTAACAACT 144
|||||||||||.||..||| .||.||||| ||| .||||||
BPUM_1488___p 100 ACACTTGTCGGCGATGAAA-----GTAAAATCAAACCATACATAACAA-- 142
BSNT_02604___ 145 ACATCAGATCGCATCACGGTGCTGCACGCAGATGAAGTGATTGAGCCTAC 194
|||.| ||.|||||||||.|..|..|.|||.|.|||||.|||||.||.||
BPUM_1488___p 143 ACAAC-GAGCGCATCACGATTTTAGATGCAAAAGAAGTCATTGAACCGAC 191
BSNT_02604___ 195 GGATGAACCTGTCCGTGCCGTGCGAAGAAAAAAGAACTCATCTATGGTTC 244
.||||||||.||.|||||.||..|..|.||||||.|.|||||||||||..
BPUM_1488___p 192 AGATGAACCAGTGCGTGCAGTTAGGCGTAAAAAGGATTCATCTATGGTGA 241
BSNT_02604___ 245 TTATGGCGCAGGAGGT-TGCGGAAAACAGAGCTGACGCCTGCATTTCAGC 293
..||||||||.||.|| |.||.|..|| ||||.||.|||||.||||||||
BPUM_1488___p 242 AAATGGCGCAAGAAGTATCCGAAGGAC-GAGCAGATGCCTGTATTTCAGC 290
BSNT_02604___ 294 AGGAAATACCGGTGCATTAATGACAGCCGGTCTCTTTATTGTCGGAAGAA 343
||||||.||.||.|||.|.||||||||.||.||.|||||.||.|||||||
BPUM_1488___p 291 AGGAAACACTGGCGCACTTATGACAGCAGGACTGTTTATCGTAGGAAGAA 340
BSNT_02604___ 344 TTAAAGGAATTGACCGTCCGGCGCTTGCCCCGACACTTCCGAC---TGTT 390
||.|.||.||.||..|.||.||||||||.||||||||.||.|| ||.|
BPUM_1488___p 341 TTGATGGCATCGATAGACCAGCGCTTGCTCCGACACTGCCAACACTTGAT 390
BSNT_02604___ 391 TCGGGAGACGGATTTCTTCTCCTTGATGTCGGCGCCAATGTCGATGCCAA 440
||.|| |||.|||.|..|.||.||||||||.||.||.||.||||||||
BPUM_1488___p 391 --GGCAG-CGGTTTTTTATTACTAGATGTCGGTGCTAACGTTGATGCCAA 437
BSNT_02604___ 441 ACCGGAGCACCTCGTTCAATATGCCATCATGGGTTCTGTTTATTCTCAGC 490
|||.||.|||||.||.||||||||.||.||||||||..||||..|..|||
BPUM_1488___p 438 ACCAGAACACCTTGTGCAATATGCGATGATGGGTTCAATTTACGCAGAGC 487
BSNT_02604___ 491 AAGTGCGCGGTGTCACTTCA---------CCGAGAGTCGGACTTTTAAAT 531
||||...|.|| |||.|.||.|||.|.||||||
BPUM_1488___p 488 ---------GTGTTTTTCCAAAGAGTAATCCGCGTGTAGGATTGTTAAAT 528
BSNT_02604___ 532 GTCGGAACAGAAGATAAAAAAGGAAACGAACTGACGAAGCAGACGTTTCA 581
||.||||||||||||||||||||.|||||.||.|||||..|.||.|||.|
BPUM_1488___p 529 GTAGGAACAGAAGATAAAAAAGGCAACGATCTCACGAAAAAAACCTTTGA 578
BSNT_02604___ 582 AATTTTAAAAGAAACAGCAAACATCAATTTTATCGGAAACGTGGAAGCGC 631
|.|.||||||| ||.||.||.|.|||||..|.|||||.|||||..|.|
BPUM_1488___p 579 ATTGTTAAAAG---CATCAGACTTGAATTTCGTAGGAAATGTGGAGTCTC 625
BSNT_02604___ 632 GAGACCTTTTAGATGATGTGGCGGATGTTGTAGTAACAGACGGCTTTACC 681
|.|||.|.|||||.|.|||.||.||.||.||.||.|||||.||.||.||.
BPUM_1488___p 626 GTGACTTATTAGAAGGTGTAGCTGACGTCGTTGTCACAGATGGTTTCACA 675
BSNT_02604___ 682 GGGAATGTTACACTCAAAACGCTGGAAGGCTCTGCGTTGTCTATTTTTAA 731
||.|||.|..|.||.||||||.|.||||||.|.||..|.|||.|.|||||
BPUM_1488___p 676 GGAAATATCGCTCTGAAAACGATTGAAGGCACAGCTCTTTCTGTATTTAA 725
BSNT_02604___ 732 AATGATGAGAGACGTAATGACGTCTACTTTGACATCCAAGCTT----GC- 776
||||.|||.||| .||.||.|||||| ||||| ||
BPUM_1488___p 726 AATGCTGAAAGA------------AACCTTAACATCC-AGCTTCACAGCA 762
BSNT_02604___ 777 -----AGCAGCTG---TGCTGAAGCCAAAATTGAAAGAAATGAAAATGAA 818
|||.|||| ||.|||||||.|||||||...|.||||||...||
BPUM_1488___p 763 AAAATAGCGGCTGGTATGATGAAGCCGAAATTGATGCAGATGAAATCCAA 812
BSNT_02604___ 819 TATGGAGTA-TTCGAATTATGGCGGAGCAAGTCTTTTTGGCTTAAAAGCG 867
.|||||.|| |.|||| |||||.||.||...|.|.|||||.||||||||.
BPUM_1488___p 813 AATGGATTACTCCGAA-TATGGTGGTGCCGCTTTATTTGGTTTAAAAGCA 861
BSNT_02604___ 868 CCTGTGATCAAGGCGCACGGCTCTTCAGATTCAAATGCTGTATTCCATGC 917
|||||.||.||.||||||||.||.||.|||..|||.||..|.||.|||||
BPUM_1488___p 862 CCTGTCATTAAAGCGCACGGTTCCTCTGATGAAAACGCCATTTTTCATGC 911
BSNT_02604___ 918 GATTCGGCAAGCAAGAGAGATGGTCAGCCAAA-ATGTGGCTGCGCTCATT 966
.|||||.||.|||.|.||.||.|| ||..||| |.||..|.||..|||||
BPUM_1488___p 912 CATTCGTCAGGCACGTGATATCGT-AGAAAAAGACGTTTCAGCCATCATT 960
BSNT_02604___ 967 CAGGAAGAAGTGAAAGAAGAAAAAACAGATGAGT----AG 1002
||..|||||||..||.||||||..||..|.|||| |
BPUM_1488___p 961 CATCAAGAAGTCCAAAAAGAAACCACGAACGAGTCTTAA- 999
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.