Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02603 and BPUM_1487

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_02603___ylpC.1.24716.seq
#    -bsequence pep-align/BPUM_1487___ylpC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02603___ylpC-BPUM_1487___ylpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02603___ylpC-BPUM_1487___ylpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02603___ylpC
# 2: BPUM_1487___ylpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity:     160/188 (85.1%)
# Similarity:   177/188 (94.1%)
# Gaps:           0/188 ( 0.0%)
# Score: 794.0
# 
#
#=======================================

BSNT_02603___      1 MRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPEL     50
                     |:.||:|||:||||||.:||||||||||.||||||||:||||||||||||
BPUM_1487___y      1 MKLNKKERQKLLQQTISSTPFITDEELATKFGVSIQTVRLDRLELSIPEL     50

BSNT_02603___     51 RERIKNVAEKTLEDEVKSLSLDEVIGEIIDLELDDQAISILEIKQEHVFS    100
                     |||||:|||||||||||||.|||||||:||:|||||||||||:::|||||
BPUM_1487___y     51 RERIKHVAEKTLEDEVKSLPLDEVIGEMIDVELDDQAISILEVRKEHVFS    100

BSNT_02603___    101 RNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKA    150
                     ||||||||||||||||||||||||||||||.|:|:||||||||||||:||
BPUM_1487___y    101 RNQIARGHHLFAQANSLAVAVIDDELALTAKANIKFTRQVKQGERVVSKA    150

BSNT_02603___    151 KVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMYRSKHS    188
                     ||.:.:|||||||||||||||||:||||.|.|||||..
BPUM_1487___y    151 KVASHDKEKGRTVVEVNSYVGEEVVFSGDFVMYRSKQK    188


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