Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02603 and BPUM_1487

See Amino acid alignment / Visit BSNT_02603 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence dna-align/BSNT_02603___ylpC.1.24716.seq
#    -bsequence dna-align/BPUM_1487___ylpC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02603___ylpC-BPUM_1487___ylpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02603___ylpC-BPUM_1487___ylpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02603___ylpC
# 2: BPUM_1487___ylpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 571
# Identity:     427/571 (74.8%)
# Similarity:   427/571 (74.8%)
# Gaps:           8/571 ( 1.4%)
# Score: 1549.0
# 
#
#=======================================

BSNT_02603___      1 ATGAGAAGAAATAAGAGAGAACGCCAGGAATTACTTCAGCAGACGATTCA     50
                     ||||.|..||||||.|.||||||.||..||.|.||.|||||.|||||  .
BPUM_1487___y      1 ATGAAACTAAATAAAAAAGAACGTCAAAAACTTCTCCAGCAAACGAT--C     48

BSNT_02603___     51 AG--CAACCCCCTTTATTACAGATGAAGAATTAGCGGGTAAATTCGGGGT     98
                     ||  ||||.||.||.|||||.|||||||||||.||...|||||||||.||
BPUM_1487___y     49 AGCTCAACTCCGTTCATTACTGATGAAGAATTGGCAACTAAATTCGGTGT     98

BSNT_02603___     99 GAGCATCCAGACGATACGTTTGGACCGCTTAGAGCTTTCCATACCTGAAC    148
                     .||.||.||.|||.|.|||.|.||.||.||.||.||.||.||.||||||.
BPUM_1487___y     99 AAGTATTCAAACGGTTCGTCTAGATCGTTTGGAACTGTCAATCCCTGAAT    148

BSNT_02603___    149 TGAGAGAAAGAATTAAGAACGTGGCAGAGAAAACACTTGAGGACGAAGTG    198
                     ||.|.||||||||||||.|.|||||.||.||.|||.|.|||||.||||||
BPUM_1487___y    149 TGCGCGAAAGAATTAAGCATGTGGCCGAAAAGACATTAGAGGATGAAGTG    198

BSNT_02603___    199 AAGTCTCTGTCACTTGATGAAGTTATCGGAGAAATTATTGACCTTGAGCT    248
                     ||.||.||..||||.||||||||.||.||||||||.|||||..|.|||||
BPUM_1487___y    199 AAATCACTTCCACTGGATGAAGTGATTGGAGAAATGATTGATGTAGAGCT    248

BSNT_02603___    249 GGATGATCAGGCGATATCCATTTTAGAAATAAAACAGGAGCACGTGTTCA    298
                     .|||||.||.||.||.||||||||||||.|.|.|.|.|||||.||.||.|
BPUM_1487___y    249 TGATGACCAAGCTATTTCCATTTTAGAAGTGAGAAAAGAGCATGTATTTA    298

BSNT_02603___    299 GCCGGAATCAGATTGCGAGAGGACACCATTTATTTGCACAGGCGAATTCT    348
                     ||||.||.||.|||||.||.|||||.|||.|.||.||.|||||.|||||.
BPUM_1487___y    299 GCCGAAACCAAATTGCAAGGGGACATCATCTCTTCGCCCAGGCAAATTCG    348

BSNT_02603___    349 TTGGCAGTTGCAGTCATTGATGACGAGCTGGCGCTGACTGCAAGTGCAGA    398
                     .|.|||||.||.||||||||.||.||.|||||..|.||.||||..|||.|
BPUM_1487___y    349 CTTGCAGTAGCGGTCATTGACGATGAACTGGCTTTAACAGCAAAAGCAAA    398

BSNT_02603___    399 CATCCGCTTTACAAGACAGGTAAAGCAGGGTGAACGTGTCGTAGCAAAAG    448
                     .||....||||||||.|||||.||.||.||.|||||.|||||..||||||
BPUM_1487___y    399 TATTAAATTTACAAGGCAGGTTAAACAAGGCGAACGAGTCGTCTCAAAAG    448

BSNT_02603___    449 CGAAAGTGACGGCTGTC--GAAAAAGAAAAAGGAAGAACGGTTGTCGAAG    496
                     |.|||||  .|.||..|  ||.|||||||||||.|||||.||.||.||||
BPUM_1487___y    449 CCAAAGT--AGCCTCGCATGATAAAGAAAAAGGCAGAACTGTAGTTGAAG    496

BSNT_02603___    497 TGAACAGCTACGTTGGCGAAGAAATTGTTTTTTCTGGACGCTTTGACATG    546
                     ||||||||||.||.||.||||||.||||.||.||.|||..|||||.||||
BPUM_1487___y    497 TGAACAGCTATGTCGGTGAAGAAGTTGTCTTCTCAGGAGACTTTGTCATG    546

BSNT_02603___    547 TATCGTTCAAAACATTCATAA    567
                     |||||.||||||||....|||
BPUM_1487___y    547 TATCGCTCAAAACAAAAGTAA    567


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