Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02598 and BPUM_1483
See
DNA alignment /
Visit
BSNT_02598 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence pep-align/BSNT_02598___yloV.1.24716.seq
# -bsequence pep-align/BPUM_1483.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02598___yloV-BPUM_1483.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02598___yloV-BPUM_1483.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02598___yloV
# 2: BPUM_1483
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 559
# Identity: 400/559 (71.6%)
# Similarity: 473/559 (84.6%)
# Gaps: 6/559 ( 1.1%)
# Score: 2010.0
#
#
#=======================================
BSNT_02598___ 1 MSIRTLNGRTFAEMILAGAQNLSQNASAVDALNVFPVPDGDTGTNMNLSM 50
||||.|:||:||:||||||.:|||||..||||||||||||||||||||||
BPUM_1483 1 MSIRNLDGRSFAKMILAGAHHLSQNAQIVDALNVFPVPDGDTGTNMNLSM 50
BSNT_02598___ 51 TSGAREVEQMDTDDIGKVGSALSKGLLMGARGNSGVILSQLFRGFSKSIE 100
||||:.||:.:||.|||||.|||||||||||||||||||||||||||.||
BPUM_1483 51 TSGAKAVEETNTDHIGKVGVALSKGLLMGARGNSGVILSQLFRGFSKQIE 100
BSNT_02598___ 101 TKKEINALEFAAALQAGVDMAYKAVMKPVEGTILTVAKDAAKKAMILAEK 150
.|:.|:|.|||.|||||||.||||||||:|||||||||||||||:.::..
BPUM_1483 101 QKEMIDAKEFALALQAGVDTAYKAVMKPIEGTILTVAKDAAKKAVAVSAT 150
BSNT_02598___ 151 ETDITALMIAVTEEAEASLNRTPELLPVLKEVGVVDSGGKGLLCVYEGFL 200
|.||..::....|||.|||:|||:||||||||||||||||||||||||||
BPUM_1483 151 ENDIDRVLELTIEEARASLDRTPDLLPVLKEVGVVDSGGKGLLCVYEGFL 200
BSNT_02598___ 201 ASLKGETVPQK-AVLPSLDDMVSAEHHKSAQSMMNTEDIEFGFCTEVMVR 249
|||:||.:|.| |.||:|.::|||||||||||.|||||||||:|||.||:
BPUM_1483 201 ASLRGEELPSKMASLPTLKELVSAEHHKSAQSHMNTEDIEFGYCTEFMVK 250
BSNT_02598___ 250 LDQTKREFDEGTFRQDLSQFGDSLLVIADESLAKVHIHAEEPGNVLNYAQ 299
.::.|:.|||..||:|||:|||||||::||:|||||||||:||:||:|||
BPUM_1483 251 FEEDKQSFDENAFREDLSEFGDSLLVVSDETLAKVHIHAEQPGDVLSYAQ 300
BSNT_02598___ 300 HYGELIKIKIENMREQHTSIISQESKPADNEIPPA-----KQPYGIVTVA 344
.||.||.:|||||||||:||:::|.:.|....|.| ||.:|:|:||
BPUM_1483 301 RYGSLINMKIENMREQHSSIVNEEKEHAPAATPKASAAAEKQRFGVVSVA 350
BSNT_02598___ 345 MGEGISDLFKSIGASVVIEGGQTMNPSTEDIVDAVKSVNADTVFILPNNS 394
|||||:||||||||||||||||||||||||||.|::||:|:|||||||||
BPUM_1483 351 MGEGIADLFKSIGASVVIEGGQTMNPSTEDIVTAIESVHAETVFILPNNS 400
BSNT_02598___ 395 NIIMAANQAASVVDEQVFVIPAKTVPQGMSALLAFNPDQEAEANEANMLS 444
||:|||.|||:|.:.:|.|||.|||||||||||:.|.....|.|||.||.
BPUM_1483 401 NIVMAAKQAATVSNREVVVIPTKTVPQGMSALLSLNEAASNEDNEAAMLD 450
BSNT_02598___ 445 AIQQVKSGQVTFSVRDTHIDGKDIKKGDFMGILNGTIIGTSENQLSAAKM 494
||..|||||:||:||||.|||.||.|||:||:.||.|..|::|||.|||.
BPUM_1483 451 AIDNVKSGQITFAVRDTQIDGIDIAKGDYMGLYNGKITLTAKNQLDAAKE 500
BSNT_02598___ 495 LLSEMIGEDDEIVTILYGEDASQEEAEQLEAFLSEKYEEIEVEIHNGKQP 544
||::|:.||||||||:.|||||.||.::||||:.|.:|:||||:|:||||
BPUM_1483 501 LLTKMVTEDDEIVTIIKGEDASSEEMDELEAFIEETFEDIEVEVHDGKQP 550
BSNT_02598___ 545 LYSYIVSAE 553
|||||::.|
BPUM_1483 551 LYSYILAVE 559
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.