Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02593 and BPUM_1478
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence pep-align/BSNT_02593___rpe.1.24716.seq
# -bsequence pep-align/BPUM_1478___rpe.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02593___rpe-BPUM_1478___rpe.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02593___rpe-BPUM_1478___rpe.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02593___rpe
# 2: BPUM_1478___rpe
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 163/217 (75.1%)
# Similarity: 184/217 (84.8%)
# Gaps: 1/217 ( 0.5%)
# Score: 836.0
#
#
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BSNT_02593___ 1 MIKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLI 50
|:.:||||||||||.|..:|:|||:||||.|||||||||||||:|.||.:
BPUM_1478___r 1 MVYIAPSILSADFANLEKDIRDVEQGGADYIHIDVMDGHFVPNMTFGPNV 50
BSNT_02593___ 51 VEAVRPVTDLPLDVHLMIEEPDRYIPAFAKAGADILSVHAEACPHLHRTI 100
|||:||.|.||||||||||:|||||||||||||||:|||.||||||||||
BPUM_1478___r 51 VEAIRPHTRLPLDVHLMIEQPDRYIPAFAKAGADIISVHVEACPHLHRTI 100
BSNT_02593___ 101 QLIKEQGVKAGVVLNPHTPVQVIEHVFDDLDLVLLMTVNPGFGGQKFIHS 150
|.||||||||||||||||||..||||.:|:||||.||||||||||.||.|
BPUM_1478___r 101 QHIKEQGVKAGVVLNPHTPVSHIEHVLEDVDLVLFMTVNPGFGGQAFIPS 150
BSNT_02593___ 151 VLPKIKEVKRMADEKGKKDLLIEVDGGVNKETAPLVIEAGANLLVAGSAV 200
||.|:||||.::::||..|||||:|||||.|||....|||||||||||||
BPUM_1478___r 151 VLKKVKEVKALSEQKGLTDLLIEIDGGVNVETAKSCKEAGANLLVAGSAV 200
BSNT_02593___ 201 YGQSDRKKAISEIRGSK 217
||:.:|..||..||.:
BPUM_1478___r 201 YGEDNRAVAIQAIREA- 216
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