Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02581 and BPUM_1468

See DNA alignment / Visit BSNT_02581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:08
# Commandline: needle
#    -asequence pep-align/BSNT_02581___rpoZ.1.24716.seq
#    -bsequence pep-align/BPUM_1468___rpoZ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02581___rpoZ-BPUM_1468___rpoZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02581___rpoZ-BPUM_1468___rpoZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02581___rpoZ
# 2: BPUM_1468___rpoZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 67
# Identity:      58/67 (86.6%)
# Similarity:    64/67 (95.5%)
# Gaps:           0/67 ( 0.0%)
# Score: 286.0
# 
#
#=======================================

BSNT_02581___      1 MLDPSIDSLMNKLDSKYTLVTVSARRAREMQIKKDQMIEHTISHKYVGKA     50
                     ||||||||||||||||||||||||||||||||.:||.||:|.|:|:||||
BPUM_1468___r      1 MLDPSIDSLMNKLDSKYTLVTVSARRAREMQIHQDQQIENTKSYKFVGKA     50

BSNT_02581___     51 LEEIDAGLLSFEKEDRE     67
                     |||||||||:|||||:|
BPUM_1468___r     51 LEEIDAGLLTFEKEDQE     67


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