Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02572 and BPUM_1462

See DNA alignment / Visit BSNT_02572 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_02572___ylnF.1.24716.seq
#    -bsequence pep-align/BPUM_1462.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02572___ylnF-BPUM_1462.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02572___ylnF-BPUM_1462.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02572___ylnF
# 2: BPUM_1462
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:      78/167 (46.7%)
# Similarity:   119/167 (71.3%)
# Gaps:           5/167 ( 3.0%)
# Score: 414.0
# 
#
#=======================================

BSNT_02572___      1 MLPLHISLEKKKVVIAGGGSIALRRLKSVISEGADITLVSPDVEPEIKQM     50
                     |||:|:.|..::|:|||||.||.||.:::..|...||:||||:..|:.::
BPUM_1462          1 MLPVHLDLTNQQVLIAGGGKIAARRAEALCIEPCHITIVSPDISKEMARL     50

BSNT_02572___     51 AEERRIKWEKRTIEKEDYLNAFFIIAATDNAAVNKEIAQSASPFQLVNCV    100
                     .:...:.|:::.::.||..:||||:|||::.|||:.|||:|.|.||||||
BPUM_1462         51 IDTYNLNWKEKKVDAEDLKDAFFIVAATNDPAVNEWIAQTARPHQLVNCV    100

BSNT_02572___    101 SDAELGNVYMPKIVKRGHVTVSVSTSGASPKHTKELAENVDKLIDGDFIA    150
                     |.:|||||.:||:||.|.||:|||||||||..||:||..::.|::.:.:.
BPUM_1462        101 SQSELGNVIVPKVVKAGRVTISVSTSGASPARTKQLAAEIETLLEQEDVD    150

BSNT_02572___    151 EVNRLYQVRRKK-----    162
                     .::.||..|:|:     
BPUM_1462        151 ALDALYIERKKQQRKSR    167


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