Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02569 and BPUM_1460

See DNA alignment / Visit BSNT_02569 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_02569___ylnD.1.24716.seq
#    -bsequence pep-align/BPUM_1460___cysG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02569___ylnD-BPUM_1460___cysG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02569___ylnD-BPUM_1460___cysG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02569___ylnD
# 2: BPUM_1460___cysG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     184/257 (71.6%)
# Similarity:   223/257 (86.8%)
# Gaps:           6/257 ( 2.3%)
# Score: 999.0
# 
#
#=======================================

BSNT_02569___      1 MGKVYIVGAGPGDPDLLTIKALKAIEKADVILYDRLVNKEILQYAKEQAD     50
                     ||||||||||||||||:|:||.|||::|||||||||||:|||.:||.:|:
BPUM_1460___c      1 MGKVYIVGAGPGDPDLITLKAHKAIQQADVILYDRLVNQEILAHAKPEAE     50

BSNT_02569___     51 LIYCGKLPDFHTMKQETINRFLVKYAQKGKMVVRLKGGDPFVFGRGGEEA    100
                     ||||||||:.|||:||.||..||.:|::|.:||||||||||||||||||.
BPUM_1460___c     51 LIYCGKLPNHHTMRQEAINEALVTHAKEGNVVVRLKGGDPFVFGRGGEEI    100

BSNT_02569___    101 ECLSENGIPFEIIPGITSGIAAAAYAGIPVTHREAGSNVAFVTGHYKKEE    150
                     |||:|:|||:|::|||||||||||||||||||||..||||||||||:|:|
BPUM_1460___c    101 ECLAEHGIPYEVVPGITSGIAAAAYAGIPVTHREFSSNVAFVTGHYQKDE    150

BSNT_02569___    151 DFEEKWKALATGIDTLVIYMGIKNVQQIERKLLENGRDGSTPAAFIHWGT    200
                     .|||||:||||||||||||||:|||:::::.|::||||..||||||||||
BPUM_1460___c    151 HFEEKWEALATGIDTLVIYMGVKNVERVQQLLIKNGRDPETPAAFIHWGT    200

BSNT_02569___    201 TDKQKSVFCTVETLSETVIKENITNPSLIVIGNVVNYHYKLEWFESELKK    250
                     |.:||:..|||.||||||.||.|.:|||||:|:||::|.||.|||..|.:
BPUM_1460___c    201 TTRQKTTCCTVATLSETVEKEGIEHPSLIVVGDVVHFHQKLNWFEPALIE    250

BSNT_02569___    251 QDLSEAL    257
                     :      
BPUM_1460___c    251 K------    251


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