Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02562 and BPUM_1454

See DNA alignment / Visit BSNT_02562 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence pep-align/BSNT_02562___pyrF.1.24716.seq
#    -bsequence pep-align/BPUM_1454___pyrF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02562___pyrF-BPUM_1454___pyrF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02562___pyrF-BPUM_1454___pyrF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02562___pyrF
# 2: BPUM_1454___pyrF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     168/239 (70.3%)
# Similarity:   198/239 (82.8%)
# Gaps:           5/239 ( 2.1%)
# Score: 855.0
# 
#
#=======================================

BSNT_02562___      1 MKNNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQL     50
                     || :||||||||.|.:|.||||.||:..||||||||||||||||.|::.|
BPUM_1454___p      1 MK-HLPIIALDFPSGQEALAFLEPFEGTPLFVKVGMELFYQEGPVILEAL     49

BSNT_02562___     51 KERNCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAAL    100
                     ||:||.:|||||||||||||.|||.|||.||||||||||||||:||||||
BPUM_1454___p     50 KEKNCRIFLDLKLHDIPTTVKKAMNRLAVLGVDLVNVHAAGGKQMMQAAL     99

BSNT_02562___    101 EGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKK    150
                     ||||.|||||:|||.:|||||||||||.:|:.||||::||.:||:.|.:.
BPUM_1454___p    100 EGLESGTPAGQKRPDIIAVTQLTSTSEDMMRSELLIDRSLQETVIRYGQL    149

BSNT_02562___    151 AEESGLDGVVCSVHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATP    200
                     |.|||||||||||||:||:::.:||.|||||||||:..|..:||.|||||
BPUM_1454___p    150 AYESGLDGVVCSVHESKALHEHISPDFLTVTPGIRLLNDQTDDQKRVATP    199

BSNT_02562___    201 AIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEGIKS    239
                     |.|:|:|.|.||||||||||:.|::||..:..|||    
BPUM_1454___p    200 AYAKEQGVSQIVVGRSITKADKPLEAYHQILKEWE----    234


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