Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02561 and BPUM_1453
See
DNA alignment /
Visit
BSNT_02561 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence pep-align/BSNT_02561___pyrD.1.24716.seq
# -bsequence pep-align/BPUM_1453___pyrD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02561___pyrD-BPUM_1453___pyrD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02561___pyrD-BPUM_1453___pyrD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02561___pyrD
# 2: BPUM_1453___pyrD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity: 268/311 (86.2%)
# Similarity: 285/311 (91.6%)
# Gaps: 1/311 ( 0.3%)
# Score: 1376.0
#
#
#=======================================
BSNT_02561___ 1 MLEVKLPGLDLKNPIIPASGCFGFGKEFSRFYDLSCLGAIMIKATTKEPR 50
||.|:||||.|||||||||||||||:||:..||||.||:|||||||.|||
BPUM_1453___p 1 MLNVELPGLSLKNPIIPASGCFGFGREFASLYDLSVLGSIMIKATTLEPR 50
BSNT_02561___ 51 FGNPTPRVAETGAGMLNAIGLQNPGLDSVLHNELPWLEQFDTPIIANVAG 100
||||||||||||||||||||||||||..||.|||||||||||||||||||
BPUM_1453___p 51 FGNPTPRVAETGAGMLNAIGLQNPGLKGVLENELPWLEQFDTPIIANVAG 100
BSNT_02561___ 101 SQVEDYVEVAEHISKAPNVHALELNISCPNVKTGGIAFGTNPEMAADLTK 150
|||:|||||||.||:|.|||||||||||||||||||||||:|:|||.|||
BPUM_1453___p 101 SQVDDYVEVAEQISQAKNVHALELNISCPNVKTGGIAFGTDPQMAAALTK 150
BSNT_02561___ 151 AVKEVSNVPVYVKLSPNVANITEIALAIEEAGADGLTMINTLIGMRLDLK 200
|||:||:||||||||||||||.|||.|||.||||||||||||||||||||
BPUM_1453___p 151 AVKDVSSVPVYVKLSPNVANIVEIAQAIESAGADGLTMINTLIGMRLDLK 200
BSNT_02561___ 201 TGKPILANKTGGLSGPAVKPVAIRMVYEVSQVVNIPIIGMGGVQTAEDAL 250
|||||||||||||||||:||||:|||:||||.|:||||||||||.|||.|
BPUM_1453___p 201 TGKPILANKTGGLSGPAIKPVAVRMVHEVSQAVSIPIIGMGGVQNAEDVL 250
BSNT_02561___ 251 EFLLAGASAVAVGTANFVNPFACPEIIEQLPSVLRQYGYQSIEECIGRSW 300
|||||||||||||||||||||.||||||:||:||..|||.|:||||||||
BPUM_1453___p 251 EFLLAGASAVAVGTANFVNPFICPEIIEELPNVLAAYGYSSVEECIGRSW 300
BSNT_02561___ 301 NHEKQPAHHRA 311
.||.. |||||
BPUM_1453___p 301 KHEAL-AHHRA 310
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.