Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02561 and BPUM_1453
See
Amino acid alignment /
Visit
BSNT_02561 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence dna-align/BSNT_02561___pyrD.1.24716.seq
# -bsequence dna-align/BPUM_1453___pyrD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02561___pyrD-BPUM_1453___pyrD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02561___pyrD-BPUM_1453___pyrD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02561___pyrD
# 2: BPUM_1453___pyrD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 945
# Identity: 710/945 (75.1%)
# Similarity: 710/945 (75.1%)
# Gaps: 21/945 ( 2.2%)
# Score: 2560.0
#
#
#=======================================
BSNT_02561___ 1 ATGCTAGAGGTGAAATTGCCGGGACTTGA--TTTGAAAAACCCAATCATT 48
||||||.|.||..|.||.||.|| ||| | |||.||.||.||.||.||.
BPUM_1453___p 1 ATGCTAAACGTTGAGTTACCCGG-CTT-ATCTTTAAAGAATCCGATTATC 48
BSNT_02561___ 49 CCTGCATCAGGCTGCTTCGGTTTTGGAAAAGAATT---TTCACGTTTTTA 95
|||||||||||.|||||.||.||.||.|.|||||| |||| ||.||
BPUM_1453___p 49 CCTGCATCAGGTTGCTTTGGATTCGGGAGAGAATTTGCTTCA---TTATA 95
BSNT_02561___ 96 TGATTTGTCTTGT-CTTGG-AGCCATCATGATTAAGGCTACGACAAAGGA 143
|||.||.|| ||| ||||| || .||||||||.||.||.||.||....||
BPUM_1453___p 96 TGACTTATC-TGTGCTTGGCAG-TATCATGATCAAAGCCACAACCCTAGA 143
BSNT_02561___ 144 GCCACGCTTTGGGAATCCGACGCCGCGGGTAGCTGAGACTGGTGCTGGAA 193
.|||.|.|||||.||.||.||.||..|||||||.|||||.|||||.||||
BPUM_1453___p 144 ACCAAGATTTGGTAACCCAACACCAAGGGTAGCGGAGACAGGTGCCGGAA 193
BSNT_02561___ 194 TGCTCAATGCGATCGGTCTCCAAAATCCGGGGCTGGATAGCGTGTTGCAT 243
|||||||.||.||||||||.||||||||.||.||..|..|||||.||.|.
BPUM_1453___p 194 TGCTCAACGCCATCGGTCTTCAAAATCCTGGCCTAAAAGGCGTGCTGGAA 243
BSNT_02561___ 244 AATGAGCTGCCGTGGCTTGAGCAGTTTGATACGCCGATCATTGCCAATGT 293
|||||..|.||.||||||||.||||||||||||||.||.|||||.||.||
BPUM_1453___p 244 AATGAATTACCTTGGCTTGAACAGTTTGATACGCCTATTATTGCAAACGT 293
BSNT_02561___ 294 CGCAGGTTCTCAAGTCGAGGATTATGTTGAAGTCGCAGAGCATATCAGCA 343
.||.||.||.||.|||||.||||||||.|||||.||.|||||.||||||.
BPUM_1453___p 294 GGCTGGCTCACAGGTCGATGATTATGTAGAAGTAGCGGAGCAAATCAGCC 343
BSNT_02561___ 344 AAGCGCCTAATGTTCATGCTCTTGAATTGAATATTTCCTGCCCGAATGTG 393
||||....|||||.|||||.||||||.|||||||.||.||.||||||||.
BPUM_1453___p 344 AAGCAAAAAATGTCCATGCCCTTGAACTGAATATCTCGTGTCCGAATGTT 393
BSNT_02561___ 394 AAAACAGGCGGAATCGCTTTTGGCACGAATCCTGAAATGGCTGCCGATTT 443
||||||||||||||.||.|||||.||..|||||.|||||||.||.|..||
BPUM_1453___p 394 AAAACAGGCGGAATAGCCTTTGGGACAGATCCTCAAATGGCAGCAGCATT 443
BSNT_02561___ 444 GACAAAAGCGGTGAAAGAGGTTTCGAATGTACCCGTTTATGTGAAGCTTT 493
|||||||||||||||.||.|||||....||.||.||.|||||.||.||.|
BPUM_1453___p 444 GACAAAAGCGGTGAAGGACGTTTCCTCCGTTCCTGTCTATGTCAAACTGT 493
BSNT_02561___ 494 CTCCGAACGTGGCCAATATCACAGAAATTGCATTAGCGATCGAGGAAGCG 543
||||.|||||.||.|||||....||.|||||...||||||.||....||.
BPUM_1453___p 494 CTCCTAACGTAGCTAATATTGTGGAGATTGCGCAAGCGATTGAATCTGCT 543
BSNT_02561___ 544 GGAGCGGACGGTCTTACGATGATCAACACACTAATCGGCATGAGACTCGA 593
|||||||||||.||.||||||||.||.||..|||||||.|||.|..|.||
BPUM_1453___p 544 GGAGCGGACGGACTCACGATGATTAATACGTTAATCGGTATGCGTTTAGA 593
BSNT_02561___ 594 TTTAAAAACCGGCAAACCGATATTAGCGAATAAAACAGGGGGACTTTCAG 643
|.|||||||.||.||||||||..|.||.|||||||||||.|||.|.||||
BPUM_1453___p 594 TCTAAAAACAGGGAAACCGATTCTTGCCAATAAAACAGGCGGATTATCAG 643
BSNT_02561___ 644 GCCCTGCTGTGAAGCCGGTTGCCATTCGCATGGTGTATGAAGTCAGCCAG 693
|.|||||..|.||.||.||.||..|.|||||||||.||||.|||||.||.
BPUM_1453___p 644 GTCCTGCGATCAAACCTGTCGCTGTACGCATGGTGCATGAGGTCAGTCAA 693
BSNT_02561___ 694 GTGGTCAACATCCCGATTATCGGAATGGGAGGCGTGCAGACGGCTGAAGA 743
|.|||....||||||||||||||||||||.||.|||||.|..||||||||
BPUM_1453___p 694 GCGGTTTCTATCCCGATTATCGGAATGGGCGGGGTGCAAAATGCTGAAGA 743
BSNT_02561___ 744 TGCCCTGGAATTTCTTCTCGCGGGAGCAAGCGCAGTCGCTGTCGGAACAG 793
.|..||.||||||.|.||.||.||.||.||.|||||.|||||.||.||||
BPUM_1453___p 744 CGTACTTGAATTTTTACTAGCAGGTGCGAGTGCAGTAGCTGTTGGCACAG 793
BSNT_02561___ 794 CAAACTTTGTGAATCCTTTTGCATGTCCAGAGATTATTGAACAGCTCCCA 843
|.||.||||||||.||.|||...||.|||||.||.||||||.|.||.|||
BPUM_1453___p 794 CCAATTTTGTGAACCCATTTATTTGCCCAGAAATCATTGAAGAACTGCCA 843
BSNT_02561___ 844 TCTGT-TTTGC-GCCAATACGGCTATCAATCAATTGAAGAATGCATCGGA 891
...|| ||.|| ||| ||.||.|||..|||..|.||.|||||.||||||
BPUM_1453___p 844 AACGTATTAGCAGCC--TATGGGTATTCATCTGTAGAGGAATGTATCGGA 891
BSNT_02561___ 892 AGGAGCTGGAATCATGAAAAACAACCTGCCCATCATCGCGCTTGA 936
|||||||||||.|||| ||..||.|||||||||||||||||||
BPUM_1453___p 892 AGGAGCTGGAAACATG---AAGCACTTGCCCATCATCGCGCTTGA 933
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.