Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02553 and BPUM_1446
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence pep-align/BSNT_02553___pyrR.1.24716.seq
# -bsequence pep-align/BPUM_1446___pyrR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02553___pyrR-BPUM_1446___pyrR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02553___pyrR-BPUM_1446___pyrR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02553___pyrR
# 2: BPUM_1446___pyrR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 156/181 (86.2%)
# Similarity: 167/181 (92.3%)
# Gaps: 1/181 ( 0.6%)
# Score: 783.0
#
#
#=======================================
BSNT_02553___ 1 MNQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRL 50
|.|||||||||||||||||||||||||||||.:.||.|||||||:|||||
BPUM_1446___p 1 MEQKAVILDEQAIRRALTRIAHEMIERNKGMKDVILAGIKTRGIHLAKRL 50
BSNT_02553___ 51 AERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQK 100
||||||||||||.|||:|||||||||:|||.|.:|||||||||.||.|:.
BPUM_1446___p 51 AERIEQIEGNPVIVGELDITLYRDDLTKKTDNQDPLVKGADIPADINDKT 100
BSNT_02553___ 101 VILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYI 150
:|:|||||:|||||||.|||||||||||||||||||||||||||||||||
BPUM_1446___p 101 LIVVDDVLFTGRTVRAAMDALVDVGRPSSIQLAVLVDRGHRELPIRADYI 150
BSNT_02553___ 151 GKNIPTSKSEKVMVQLDEVDQNDLVAIYENE 181
||||||||:|.|||||:||||||||||||.
BPUM_1446___p 151 GKNIPTSKAETVMVQLNEVDQNDLVAIYEK- 180
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