Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02553 and BPUM_1446
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_02553___pyrR.1.24716.seq
# -bsequence dna-align/BPUM_1446___pyrR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02553___pyrR-BPUM_1446___pyrR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02553___pyrR-BPUM_1446___pyrR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02553___pyrR
# 2: BPUM_1446___pyrR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 549
# Identity: 435/549 (79.2%)
# Similarity: 435/549 (79.2%)
# Gaps: 9/549 ( 1.6%)
# Score: 1694.0
#
#
#=======================================
BSNT_02553___ 1 -TTGAATCAAAAAGCTGTCATTCTCGACGAACAGGCAATCAGACGGGCGC 49
|.||| ||||||||.||||||||.||.|||||.|||||||||||.||||
BPUM_1446___p 1 ATGGAA-CAAAAAGCAGTCATTCTTGATGAACAAGCAATCAGACGAGCGC 49
BSNT_02553___ 50 TGACCAGGATTGCTCACGAAATGATCGAACGCAATAAAGGAATGAATAAC 99
|||||.|.|||||.||.||||||||.||.||.||.|||||.||||| |..
BPUM_1446___p 50 TGACCCGAATTGCACATGAAATGATTGAGCGTAACAAAGGGATGAA-AGA 98
BSNT_02553___ 100 TG-CATTCTTGTCGGCATTAAGACAAGAGGGATTTACCTGGCAAAACGCC 148
|| |||.||||..||.||.|||||||||||.|||.|.||.|||||.||||
BPUM_1446___p 99 TGTCATCCTTGCGGGGATCAAGACAAGAGGCATTCATCTTGCAAAGCGCC 148
BSNT_02553___ 149 TTGCGGAACGCATTGAACAGATTGAGGGAAATCCTGTTACAGTCGGTGAA 198
||||.||.||||||||.||.|||||.||||||||.||.|.|||.||||||
BPUM_1446___p 149 TTGCAGAGCGCATTGAGCAAATTGAAGGAAATCCAGTCATAGTGGGTGAA 198
BSNT_02553___ 199 ATTGATATTACTCTTTACAGAGACGATCTTTCTAAAAAAACAAGCAACGA 248
.||||||||||.||.|||.|.||.||.||..|.|||||.|||..||||.|
BPUM_1446___p 199 CTTGATATTACGCTATACCGTGATGACCTGACAAAAAAGACAGACAACCA 248
BSNT_02553___ 249 TGAACCGCTTGTAAAAGGTGCAGATATTCCGGTAGATATTACAGATCAAA 298
.||.||||||||.||.||||||||.|||||.|..||.||||..|| ||||
BPUM_1446___p 249 AGACCCGCTTGTGAAGGGTGCAGACATTCCAGCTGACATTAATGA-CAAA 297
BSNT_02553___ 299 A-AGTCATTCTCGTTGATGATGTTCTGTATACCGGAAGAACAGTCAGAGC 347
| |.|.||..||||.||||||||.||.|.|||.||.|||||.||||||||
BPUM_1446___p 298 ACACTAATCGTCGTGGATGATGTCCTATTTACAGGTAGAACCGTCAGAGC 347
BSNT_02553___ 348 AGGAATGGATGCGCTTGTTGATGTAGGCAGACCTTCCTCCATTCAGCTTG 397
||..||||||||.||.||.||||||||.|||||.||.|||||||||||||
BPUM_1446___p 348 AGCCATGGATGCCCTAGTGGATGTAGGAAGACCATCTTCCATTCAGCTTG 397
BSNT_02553___ 398 CAGTGCTTGTGGACAGAGGACACCGGGAGCTGCCGATCCGAGCGGATTAT 447
|.||.||.||.|||.|.||||||||||||||||||||.||||||||||||
BPUM_1446___p 398 CTGTTCTCGTCGACCGGGGACACCGGGAGCTGCCGATTCGAGCGGATTAT 447
BSNT_02553___ 448 ATCGGGAAAAACATCCCGACATCAAAGTCTGAAAAGGTTATGGTTCAGCT 497
||||||||.|||||.|||||||||||..|.||.|..||.||||||||.||
BPUM_1446___p 448 ATCGGGAAGAACATTCCGACATCAAAAGCAGAGACAGTGATGGTTCAACT 497
BSNT_02553___ 498 TGATGAGGTAGACCAAAACGATCTCGTCGCCATTTATGAAAACGAATAA 546
..||||.|||||.||||||||.||.|||||.||.||||||| |||||
BPUM_1446___p 498 GAATGAAGTAGATCAAAACGACCTTGTCGCTATATATGAAA---AATAA 543
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