Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02550 and BPUM_1444

See DNA alignment / Visit BSNT_02550 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence pep-align/BSNT_02550___lspA.1.24716.seq
#    -bsequence pep-align/BPUM_1444___lspA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02550___lspA-BPUM_1444___lspA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02550___lspA-BPUM_1444___lspA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02550___lspA
# 2: BPUM_1444___lspA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:     111/156 (71.2%)
# Similarity:   125/156 (80.1%)
# Gaps:           5/156 ( 3.2%)
# Score: 568.5
# 
#
#=======================================

BSNT_02550___      1 MLYYMIALLIIAADQLTKWLVVKNMELGQSIPIIDQVFYITSHRNTGAAW     50
                     |.||:||.::|..|||||||:||||.||.|.|:||..||||||||:||||
BPUM_1444___l      1 MFYYIIAFVMICLDQLTKWLIVKNMMLGDSYPVIDGFFYITSHRNSGAAW     50

BSNT_02550___     51 GILAGQMWFFYLITTAVIIGIVYYIQRYTKGQRFLGVALGLMLGGAIGNF    100
                     |||.|||||||:||..||.|||||:|::.:..:.|||||.||||||||||
BPUM_1444___l     51 GILQGQMWFFYVITLVVIAGIVYYLQKHGQKDKLLGVALALMLGGAIGNF    100

BSNT_02550___    101 IDRAVRQEVVDFIHVIIVN--YPIFNIADSSLCVGVMLLFIQMLLDSGKK    148
                     |||..|||||||.|.:..|  |||||||||||||||:||||||||| |||
BPUM_1444___l    101 IDRVFRQEVVDFAHFVFGNYHYPIFNIADSSLCVGVILLFIQMLLD-GKK    149

BSNT_02550___    149 KKEQ--    152
                     .||.  
BPUM_1444___l    150 TKESTT    155


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