Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02549 and BPUM_1443

See DNA alignment / Visit BSNT_02549 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence pep-align/BSNT_02549.1.24716.seq
#    -bsequence pep-align/BPUM_1443___ylyA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02549-BPUM_1443___ylyA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02549-BPUM_1443___ylyA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02549
# 2: BPUM_1443___ylyA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:      67/125 (53.6%)
# Similarity:    88/125 (70.4%)
# Gaps:           2/125 ( 1.6%)
# Score: 320.0
# 
#
#=======================================

BSNT_02549         1 MNDQLTAIYTELLLMKEELQSRLFEYSCFQVSTSPQAAINHKQKATLIYH     50
                     |...|..||||||.||||||::||||:.|: |.:...::|..|.|||:||
BPUM_1443___y      1 MIGDLETIYTELLQMKEELQAKLFEYTSFR-SPAEHVSMNEVQTATLLYH     49

BSNT_02549        51 IKEELQDVLLALSKIENGTFGYCEETGAPIPLAKLAVLPTARTANDFLYS    100
                     ||||||||.||::|||.||:|.||.||..|||.::::||||||.:||||.
BPUM_1443___y     50 IKEELQDVSLAIAKIEQGTYGICEATGDVIPLEQMSILPTARTVDDFLYH     99

BSNT_02549       101 VQFEKKTL-PIWKSTDIEYGQALYE    124
                     .|:|||.. |....:|..:.:|.:.
BPUM_1443___y    100 KQYEKKAFTPYPHESDDSHFEAFHM    124


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