Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02548 and BPUM_1442

See DNA alignment / Visit BSNT_02548 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence pep-align/BSNT_02548___ileS.1.24716.seq
#    -bsequence pep-align/BPUM_1442___ileS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02548___ileS-BPUM_1442___ileS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02548___ileS-BPUM_1442___ileS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02548___ileS
# 2: BPUM_1442___ileS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 921
# Identity:     768/921 (83.4%)
# Similarity:   848/921 (92.1%)
# Gaps:           0/921 ( 0.0%)
# Score: 4177.0
# 
#
#=======================================

BSNT_02548___      1 MDFKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKF     50
                     |::|||||||||:|||||||||:||:||::|.|:|||::|.||||.||.|
BPUM_1442___i      1 MNYKDTLLMPKTEFPMRGNLPNKEPEIQEEWAEKDIYQMVLERTKGRPTF     50

BSNT_02548___     51 VLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLP    100
                     :||||||||||||||||||||||||||||:|||:|::|||||||||||||
BPUM_1442___i     51 ILHDGPPYANGDIHMGHALNKILKDFIVRFKSMNGFHAPYVPGWDTHGLP    100

BSNT_02548___    101 IETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE    150
                     |||||||||||.|||||.|||||||||||||||||||.||||||||.||:
BPUM_1442___i    101 IETALTKNKKVKRKEMSTAEFRKLCEEYAWKQIEGQRNQFKRLGVRADWD    150

BSNT_02548___    151 NPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIE    200
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BPUM_1442___i    151 NPYVTLKPEYEAQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIE    200

BSNT_02548___    201 YQDKRSASIYVAFGVKDGKGVLENGERIIIWTTTPWTIPANLGISVHPDL    250
                     |:||||.||||:|.||||||||||.|:.|||||||||:||||||.|||:|
BPUM_1442___i    201 YKDKRSPSIYVSFKVKDGKGVLENDEQFIIWTTTPWTLPANLGICVHPNL    250

BSNT_02548___    251 EYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAEHP    300
                     ||||:.||.:|:||||.|||.||...||::|||.:|:|||:|:|::||||
BPUM_1442___i    251 EYSVLQVGAERYVVASELVEQVAKTLGFEEYEVVKTLKGKELDNVVAEHP    300

BSNT_02548___    301 LYGRDSLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDE    350
                     :||||||||||:|||||||||||||||||||||||:..||||||||||||
BPUM_1442___i    301 IYGRDSLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVSMKYGLDVLCPVDE    350

BSNT_02548___    351 KGVMTSEAPGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTK    400
                     |||||.|||||||:||:|||||||:||:.||||.||:|||||||||||||
BPUM_1442___i    351 KGVMTEEAPGFEGLFYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTK    400

BSNT_02548___    401 KPTIFRATAQWFASIKDFRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDW    450
                     ||||:||||||||||||||..|||.||||||||.|||.||.|||||||||
BPUM_1442___i    401 KPTIYRATAQWFASIKDFREALLDNIKETKWVPAWGETRLFNMVRDRGDW    450

BSNT_02548___    451 CISRQRAWGVPIPVFYAENGEPIITDETIEHVSELFRQHGSNIWFEKEAK    500
                     ||||||.||||||||||||||||||||||:|||:|||:||||||||||||
BPUM_1442___i    451 CISRQRVWGVPIPVFYAENGEPIITDETIQHVSQLFREHGSNIWFEKEAK    500

BSNT_02548___    501 DLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDDLVRPADL    550
                     :||||||||||||||.||||||||||||||||||||||||||||||||||
BPUM_1442___i    501 ELLPEGFTHPGSPNGEFTKEQDIMDVWFDSGSSHQAVLEERDDLVRPADL    550

BSNT_02548___    551 YLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIG    600
                     ||||||||||||||||||||||||||||||||||||.||.||||||||:|
BPUM_1442___i    551 YLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDKEGRKMSKSLG    600

BSNT_02548___    601 NVVVPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYRKIRNT    650
                     |.:.|.||.|||||:|||||||||:||||..|||.|||||||||||||||
BPUM_1442___i    601 NTIDPTKVAKQLGAEILRLWVSSVNYQADHPVSDDILKQVAEVYRKIRNT    650

BSNT_02548___    651 FRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEF    700
                     |||||||||||||..|||.||:|||||||:||||||||:|||||||:|||
BPUM_1442___i    651 FRFLHGNLFDFDPAVNAVPVEELREVDQYILIKLNKLIEKVKKAYDDYEF    700

BSNT_02548___    701 AVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLA    750
                     |||||:|||||||||||||||||||:||||||||||||||||||||||:|
BPUM_1442___i    701 AVVYHAIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLMA    750

BSNT_02548___    751 LVKLSAPILPHTADELWSHLTFVEEQSVQLTDMPETIAVPNSEATEEKFD    800
                     ||||:|||||||||||||||:||||.|||||||||.:.|..::|||.|||
BPUM_1442___i    751 LVKLTAPILPHTADELWSHLSFVEEPSVQLTDMPEGVTVSQADATEAKFD    800

BSNT_02548___    801 RFMALRDDVLKALETARNEKIIGKSLEANLKLYPNKENKELLASIKENLS    850
                     |||.:|||||||||.|||||:||:||||::.||..:|.|.|||||||::.
BPUM_1442___i    801 RFMEVRDDVLKALEIARNEKVIGRSLEASVTLYATEEVKNLLASIKEDVK    850

BSNT_02548___    851 QLFIVSELIISEENDAPNDAQSFATGKIAVEKAEGEMCERSRVISKDVGA    900
                     ||||:|||.:.:..:|...|..:.:|:|.|:|||||:|||||:|||||||
BPUM_1442___i    851 QLFIISELTVEDAQNADTSAPEYTSGRIVVQKAEGELCERSRIISKDVGA    900

BSNT_02548___    901 NPKYPTLSLRNAEIVEKYYQK    921
                     |||||||||:||||||||||.
BPUM_1442___i    901 NPKYPTLSLKNAEIVEKYYQN    921


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02548 and BPUM_1442

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
