Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02544 and BPUM_1440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:04
# Commandline: needle
# -asequence pep-align/BSNT_02544___ylmH.1.24716.seq
# -bsequence pep-align/BPUM_1440___ylmH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02544___ylmH-BPUM_1440___ylmH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02544___ylmH-BPUM_1440___ylmH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02544___ylmH
# 2: BPUM_1440___ylmH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity: 164/258 (63.6%)
# Similarity: 202/258 (78.3%)
# Gaps: 1/258 ( 0.4%)
# Score: 849.0
#
#
#=======================================
BSNT_02544___ 1 MSDIYQHFRKDERAFIDQALEWKRIVQEQYRMKLTDFLDPREQVILSAVT 50
||||||||||||:.|:||.|.||:|..:|||:|||||||||||.|..:|.
BPUM_1440___y 1 MSDIYQHFRKDEQPFVDQVLGWKKIALDQYRLKLTDFLDPREQFITQSVI 50
BSNT_02544___ 51 GQAD-VGLAFSGGYDRAERKRAILYPEYITPEVSDFELQAFNVCYADKFV 99
..|| :|:.|.|||:.||||||::||||:.|...|.||..|.|.||.||:
BPUM_1440___y 51 QHADELGIMFFGGYEGAERKRALIYPEYLEPATQDAELSYFQVNYAKKFI 100
BSNT_02544___ 100 SVDHRSLLGALMGIGLKRQKFGDIVFSETAVQLIVSADTADFVAAQLTQA 149
|::|..|||:|:|.|||||||||::|||..||.|.::|.||||.||||..
BPUM_1440___y 101 SLEHPKLLGSLIGTGLKRQKFGDLLFSEEDVQFICTSDVADFVRAQLTHV 150
BSNT_02544___ 150 GKAAVSLEKIDLSDLNIPAVDVEIRDDTVSSLRLDAVCASMSRQSRQKSQ 199
|:|:||||:|..:||.......:|::||:||||||||||::|||||||:|
BPUM_1440___y 151 GRASVSLEEITQADLKPVISKTDIKEDTISSLRLDAVCAAISRQSRQKAQ 200
BSNT_02544___ 200 TLVKNGLVKVNWKVVEDPSYIVAEGDMLSIRGFGRCSLTKIEGKTKKDKW 249
.|||||||||||||.||||:.:.|||.||:|||||.||..|:|||||||:
BPUM_1440___y 201 LLVKNGLVKVNWKVTEDPSFTIGEGDQLSVRGFGRFSLKTIDGKTKKDKF 250
BSNT_02544___ 250 RVTFERQK 257
:||||...
BPUM_1440___y 251 KVTFELLT 258
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