Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02543 and BPUM_1439

See DNA alignment / Visit BSNT_02543 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence pep-align/BSNT_02543___ylmG.1.24716.seq
#    -bsequence pep-align/BPUM_1439___ylmG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02543___ylmG-BPUM_1439___ylmG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02543___ylmG-BPUM_1439___ylmG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02543___ylmG
# 2: BPUM_1439___ylmG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 93
# Identity:      66/93 (71.0%)
# Similarity:    79/93 (84.9%)
# Gaps:           3/93 ( 3.2%)
# Score: 342.0
# 
#
#=======================================

BSNT_02543___      1 MILYQVFSVLNLLITIYSFALIIYIFMSWVPSTRETAVGRFLASICEPYL     50
                     |||..:|::|..::||||||:|||||||||||.|||::||||.:||||||
BPUM_1439___y      1 MILNFIFNILGTVLTIYSFAIIIYIFMSWVPSARETSIGRFLTNICEPYL     50

BSNT_02543___     51 EPFRKIIPPIAMLDISPIVAILVLRFATT-GLWGLYRMIAF--     90
                     ||||||||||.|:|||||||:||:|||:| ||.|||.||..  
BPUM_1439___y     51 EPFRKIIPPIGMIDISPIVALLVIRFASTYGLPGLYNMIVRFM     93


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