Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02543 and BPUM_1439

See Amino acid alignment / Visit BSNT_02543 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence dna-align/BSNT_02543___ylmG.1.24716.seq
#    -bsequence dna-align/BPUM_1439___ylmG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02543___ylmG-BPUM_1439___ylmG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02543___ylmG-BPUM_1439___ylmG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02543___ylmG
# 2: BPUM_1439___ylmG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     192/294 (65.3%)
# Similarity:   192/294 (65.3%)
# Gaps:          33/294 (11.2%)
# Score: 593.5
# 
#
#=======================================

BSNT_02543___      1 ATGAT-----CCTTTATCAAGTTTTTTCGGTTTTA--AAC-TTATTAATC     42
                     .||||     .|||||     |||||....|||||  ||| .|||||   
BPUM_1439___y      1 GTGATTCTAAACTTTA-----TTTTTAACATTTTAGGAACGGTATTA---     42

BSNT_02543___     43 ACAATATACTCATTTGCCCTGATCATATATATTTTTATGTCATGGGTGCC     92
                     ||.||.||||||||.||..|.||.||.||.||.|||||||||||||||||
BPUM_1439___y     43 ACGATTTACTCATTCGCGATTATTATTTACATCTTTATGTCATGGGTGCC     92

BSNT_02543___     93 GAGTACGAGGGAAACAGCAGTCGGGCGTTTTTTGGCTTCGATTTGTGAAC    142
                     ...|.|.||.||||||.||.|.||.||||||.||.|....|||||.||||
BPUM_1439___y     93 ATCTGCAAGAGAAACATCAATTGGCCGTTTTCTGACAAATATTTGCGAAC    142

BSNT_02543___    143 CATATCTCGAACCATTCAGAAAAATCATCCCTCCGATTGCAATGCTGGAT    192
                     |.|||.|.||||||||..|.|||||.||.||.||.||||..|||.|.||.
BPUM_1439___y    143 CGTATTTAGAACCATTTCGTAAAATTATTCCGCCAATTGGCATGATTGAC    192

BSNT_02543___    193 ATTTCACCAATCGTAGCAATACTTGTGCTTCGGTTTGCGACAACCGGCTT    242
                     ||.||.|||||.||.|||.|.||||||.||||.|||||..|||    |.|
BPUM_1439___y    193 ATCTCGCCAATTGTGGCATTGCTTGTGATTCGTTTTGCATCAA----CGT    238

BSNT_02543___    243 GTGG-------GGACTTTATCGCATGATTG--CGTTTTAA----    273
                     .|||       ||.|||||....|||||||  ||.||.|.    
BPUM_1439___y    239 ATGGACTACCTGGTCTTTACAATATGATTGTACGCTTCATGTAG    282


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