Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02533 and BPUM_1434

See DNA alignment / Visit BSNT_02533 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_02533___ylmA.1.24716.seq
#    -bsequence pep-align/BPUM_1434___ylmA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02533___ylmA-BPUM_1434___ylmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02533___ylmA-BPUM_1434___ylmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02533___ylmA
# 2: BPUM_1434___ylmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     174/265 (65.7%)
# Similarity:   216/265 (81.5%)
# Gaps:           7/265 ( 2.6%)
# Score: 927.0
# 
#
#=======================================

BSNT_02533___      1 -MILQLDNVSLKRNGKWILRDIHWKVEEKENWVLYGLNGAGKTALLNMLC     49
                      :.|:|.||||||||||:|:.:.|:|.::|:|||||||||||||||||||
BPUM_1434___y      1 MVSLELKNVSLKRNGKWLLQSVDWQVNKEEHWVLYGLNGAGKTALLNMLC     50

BSNT_02533___     50 SYYFPTSGEMQVLGHEFGKTELGEKLRRKIGLVSAALQQKLYPADSAFEI     99
                     ||||||||||.||||.|||..||||||:||||:||.|::||:..|:||||
BPUM_1434___y     51 SYYFPTSGEMTVLGHVFGKEALGEKLRKKIGLISAGLEKKLHRDDNAFEI    100

BSNT_02533___    100 ALSGAYASIGLYETPSKETREKAIGLLEDLGAIEYADRRYETLSQGEKQR    149
                     .||||:|||||||||:.|.|||||.||:..|:.:||:|.||||||||||:
BPUM_1434___y    101 VLSGAFASIGLYETPTDEIREKAIDLLKAFGSFKYANRTYETLSQGEKQK    150

BSNT_02533___    150 ALIARALMADPELLILDEPVTGLDFIAREKLLDTITYIANKENAPSILYV    199
                     .|||||||.||:|||||||||||||:|||::|:||::||:|.:||::||.
BPUM_1434___y    151 VLIARALMNDPKLLILDEPVTGLDFLAREQVLETISFIASKPDAPTMLYT    200

BSNT_02533___    200 THHAEEILPVFDKALLLKQGEVFGSGEIKEMLTDQVLSAFFDTPIHVLWN    249
                     |||||||||||...||||.|.||..|:.|||:|..:||:||:..:.|:|.
BPUM_1434___y    201 THHAEEILPVFQHTLLLKNGSVFDQGKTKEMMTSDLLSSFFECAVDVMWR    250

BSNT_02533___    250 QDRPFLTRAEPITNA    264
                     ..||.|::.      
BPUM_1434___y    251 NGRPHLSKL------    259


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