Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02532 and BPUM_1427

See DNA alignment / Visit BSNT_02532 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_02532___sigG.1.24716.seq
#    -bsequence pep-align/BPUM_1427___sigG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02532___sigG-BPUM_1427___sigG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02532___sigG-BPUM_1427___sigG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02532___sigG
# 2: BPUM_1427___sigG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     229/260 (88.1%)
# Similarity:   233/260 (89.6%)
# Gaps:          24/260 ( 9.2%)
# Score: 1159.0
# 
#
#=======================================

BSNT_02532___      1 -----------------------MGKLFRQLQDEGDDSAREKLVNGNLRL     27
                                            |.||||||||||||:||||||||||||
BPUM_1427___s      1 MSRNKVEICGVDTSKLPVLKNDEMRKLFRQLQDEGDDTAREKLVNGNLRL     50

BSNT_02532___     28 VLSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLSHNVKFSTYAVPMII     77
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
BPUM_1427___s     51 VLSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLSHNVRFSTYAVPMII    100

BSNT_02532___     78 GEIRRYLRDNNPIRVSRSLRDIAYKALQVRERLISETSKEPTAEDIAKVL    127
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1427___s    101 GEIRRYLRDNNPIRVSRSLRDIAYKALQVRERLISETSKEPTAEDIAKVL    150

BSNT_02532___    128 EVPHEEIVFALDAIQDPVSLFEPIYNDGGDPIYVMDQISDERNTDSQWIE    177
                     |||||||||||||||||||||||||||||||||||||||||||.|:||:|
BPUM_1427___s    151 EVPHEEIVFALDAIQDPVSLFEPIYNDGGDPIYVMDQISDERNKDTQWVE    200

BSNT_02532___    178 ELALKEGMRRLNDREKMILRKRFFQGKTQMEVAEEIGISQAQVSRLEKAA    227
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1427___s    201 ELALKEGMRRLNDREKMILRKRFFQGKTQMEVAEEIGISQAQVSRLEKAA    250

BSNT_02532___    228 IKQMNKNIHQ    237
                     ||||||||. 
BPUM_1427___s    251 IKQMNKNIF-    259


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