Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02532 and BPUM_1427
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:03
# Commandline: needle
# -asequence dna-align/BSNT_02532___sigG.1.24716.seq
# -bsequence dna-align/BPUM_1427___sigG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02532___sigG-BPUM_1427___sigG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02532___sigG-BPUM_1427___sigG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02532___sigG
# 2: BPUM_1427___sigG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 790
# Identity: 580/790 (73.4%)
# Similarity: 580/790 (73.4%)
# Gaps: 86/790 (10.9%)
# Score: 2340.0
#
#
#=======================================
BSNT_02532___ 0 -------------------------------------------------- 0
BPUM_1427___s 1 GTGTCCAGAAATAAAGTGGAAATCTGCGGAGTCGACACCTCCAAGCTGCC 50
BSNT_02532___ 1 -------------------ATGGGAAAGCTGTTTAGGCAGCTGCAGGATG 31
|||.||||..||||.||.||||||||.||||
BPUM_1427___s 51 TGTTCTGAAAAATGACGAGATGAGAAAATTGTTCAGACAGCTGCAAGATG 100
BSNT_02532___ 32 AAGGCGATGATTCAGCAAGAGAAAAGCTTGTAAACGGGAACTTGCGTCTT 81
|.||.||.|||.||||||||||||||||.||.||.||.||.||.||..|.
BPUM_1427___s 101 AGGGTGACGATACAGCAAGAGAAAAGCTAGTCAATGGCAATTTACGGTTG 150
BSNT_02532___ 82 GTCTTAAGTGTCATTCAACGATTTAATAACAGAGGGGAGTATGTTGATGA 131
||.||||||||.|||||.||.||.||.||||||||.||||||||.|||||
BPUM_1427___s 151 GTTTTAAGTGTGATTCAGCGTTTCAACAACAGAGGCGAGTATGTCGATGA 200
BSNT_02532___ 132 CTTATTTCAAGTCGGCTGCATCGGACTAATGAAATCCATTGATAATTTTG 181
..|.||||||||.|||||.||||||.||||||||||.|||||||||||||
BPUM_1427___s 201 TCTCTTTCAAGTAGGCTGTATCGGATTAATGAAATCAATTGATAATTTTG 250
BSNT_02532___ 182 ACCTAAGCCACAATGTTAAGTTTTCAACATACGCTGTACCTATGATTATC 231
|..|||||||||||||.|..||||||||.||.||.||.||||||||.||.
BPUM_1427___s 251 ATTTAAGCCACAATGTCAGATTTTCAACTTATGCGGTTCCTATGATCATA 300
BSNT_02532___ 232 GGAGAGATCCGCAGGTATTTACGCGATAATAACCCGATCC--GTGTCTCA 279
|||||.|||||..|.||.||.||.|||||.||||||||.| |||||||
BPUM_1427___s 301 GGAGAAATCCGTCGATACTTGCGTGATAACAACCCGATTCGGGTGTCTC- 349
BSNT_02532___ 280 AGATCACTCCGGGACATCGCTTACAAGGCGCTTCAGGTAAGAGAGCGGTT 329
|.|||||..|.||.||.||.||.|||||.||||||||..|.|||.||.|
BPUM_1427___s 350 -GCTCACTAAGAGATATTGCCTATAAGGCACTTCAGGTCCGTGAGAGGCT 398
BSNT_02532___ 330 AATCAGTGAGACAAGCAAGGAGCCGACTGCAGAAGACATCGCAAAAGTTC 379
.||.||||||||||||||||||||.||||||||||||||.||.|||||.|
BPUM_1427___s 399 GATTAGTGAGACAAGCAAGGAGCCAACTGCAGAAGACATTGCCAAAGTGC 448
BSNT_02532___ 380 TTGAAGTACCGCATGAGGAAATTGTATTTGCGCTT-GATGCCATCCAGGA 428
|.|||||.||.||||||||||||||.||||| ||| |||||.||.||.||
BPUM_1427___s 449 TGGAAGTGCCTCATGAGGAAATTGTCTTTGC-CTTAGATGCGATTCAAGA 497
BSNT_02532___ 429 TCCGGTTTCTCTATTTGAACCGATCTATAACGACGGCGGAGACCCGATCT 478
|||.||.|||.|.|||||||||||||||||.|||||.|||||.|||||.|
BPUM_1427___s 498 TCCTGTCTCTTTGTTTGAACCGATCTATAATGACGGAGGAGATCCGATTT 547
BSNT_02532___ 479 ATGTGATGGACCAAATCAGTGATGAGCGTAATACAGATTCACAATGGATT 528
||||||||||.|||||.||||||||.||.||.|.||||.||||||||.|.
BPUM_1427___s 548 ATGTGATGGATCAAATTAGTGATGAACGGAACAAAGATACACAATGGGTG 597
BSNT_02532___ 529 GAAGAGCTGGCTTTAAAAGAGGGCATGAGAAGGCTGAACGATAGGGAAAA 578
|||||..||||.|||||||||||||||.|.||..|||||||.||||||||
BPUM_1427___s 598 GAAGAATTGGCCTTAAAAGAGGGCATGCGCAGATTGAACGACAGGGAAAA 647
BSNT_02532___ 579 AATGATTTTGAGAAAGCGATTCTTCCAAGGGAAAACCCAAATGGAAGTCG 628
|||||||.|..|.||.||.|||||||||||.|||||.|||||||||||||
BPUM_1427___s 648 AATGATTCTTCGCAAACGCTTCTTCCAAGGCAAAACGCAAATGGAAGTCG 697
BSNT_02532___ 629 CCGAGGAAATCGGAATTTCTCAGGCGCAGGTGTCCAGACTTGAAAAAGCG 678
|.||||||||||||||||||||.||.||.||.||.||.|||||||||||.
BPUM_1427___s 698 CTGAGGAAATCGGAATTTCTCAAGCACAAGTCTCGAGGCTTGAAAAAGCA 747
BSNT_02532___ 679 GCTATCAAACAAATGAATAAAAATATTCATC----AATAA 714
||.||.||||||||||||||||| |||| ||
BPUM_1427___s 748 GCCATTAAACAAATGAATAAAAA----CATCTTTTAA--- 780
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