Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02530 and BPUM_1425

See DNA alignment / Visit BSNT_02530 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_02530___spoIIGA.1.24716.seq
#    -bsequence pep-align/BPUM_1425___spoIIGA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02530___spoIIGA-BPUM_1425___spoIIGA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02530___spoIIGA-BPUM_1425___spoIIGA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02530___spoIIGA
# 2: BPUM_1425___spoIIGA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     185/309 (59.9%)
# Similarity:   241/309 (78.0%)
# Gaps:           0/309 ( 0.0%)
# Score: 1018.0
# 
#
#=======================================

BSNT_02530___      1 MKIYLDVIWLLNFCFDALLLLLTAFILKRHVKKRRLVGGAFIGSSIVLLM     50
                     |.||||||||||||||.||||||||||||.|||||.:.||.||||||||:
BPUM_1425___s      1 MVIYLDVIWLLNFCFDLLLLLLTAFILKRQVKKRRYMLGALIGSSIVLLL     50

BSNT_02530___     51 FTPFSPIVEHPAGKLAFSVVIVVVTFGFKRFRFFFQNLFSFYFATFLMGG    100
                     ||||:.:|.||.|||.||:.||:.||||:|||.||||||:|||.||||||
BPUM_1425___s     51 FTPFAMVVSHPLGKLLFSIFIVLATFGFQRFRSFFQNLFAFYFVTFLMGG    100

BSNT_02530___    101 GIIGAHSLLQSNSIVQNGVMITNQTGFGDPISWLFIVAGFPALWFFSKRR    150
                     |:||.||.||:|:::|||::|:...||||||||||::.||||:|.|||:|
BPUM_1425___s    101 GMIGVHSFLQTNTVIQNGLLISQNDGFGDPISWLFVLTGFPAIWLFSKKR    150

BSNT_02530___    151 IEDIETKNIQYEERVSVQADLGSQTLHVRGLIDSGNQLYDPLTKTPVMII    200
                     :.::.||..||:|:|.|:..:..:|:.::||:|||||||||:|||||||:
BPUM_1425___s    151 LGEVGTKKRQYDEQVLVELHIHGETIRLKGLVDSGNQLYDPMTKTPVMIV    200

BSNT_02530___    201 YIDKLEPIFGTAETMIIRNTDPLEAIEQLDDSFRFLDKMRLIPYRGVGQQ    250
                     ..|.|..|.|.:...:::.:.|:|.::::||.|..||::||:|||.||..
BPUM_1425___s    201 QADHLTAICGESFIDLMKQSHPVEVMQKIDDQFPLLDRLRLVPYRAVGHD    250

BSNT_02530___    251 NQFLLCVKPDHVTIMTKEEMISADKCLIGISTTKLSADGEFDAIIHPKML    300
                     :.||||:|||.|.|.:|..||...||.:|:|.:.||||.||.:||||.||
BPUM_1425___s    251 HGFLLCLKPDTVVIYSKTHMIQPAKCFVGLSLSGLSADQEFQSIIHPDML    300

BSNT_02530___    301 SGKAVKHVS    309
                     .||.::.||
BPUM_1425___s    301 DGKIIQGVS    309


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