Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02519 and BPUM_1417

See DNA alignment / Visit BSNT_02519 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_02519___divIB.1.24716.seq
#    -bsequence pep-align/BPUM_1417___divIB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02519___divIB-BPUM_1417___divIB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02519___divIB-BPUM_1417___divIB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02519___divIB
# 2: BPUM_1417___divIB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     159/263 (60.5%)
# Similarity:   204/263 (77.6%)
# Gaps:           4/263 ( 1.5%)
# Score: 846.5
# 
#
#=======================================

BSNT_02519___      1 MNPGQDREKIVNIEERIPKIKEQRKQKANRRLISFIMLFFIMVLIIVYLQ     50
                     |.|..:.|||||||||||||||||||||||||||||:|||||||||:|||
BPUM_1417___d      1 MRPDHENEKIVNIEERIPKIKEQRKQKANRRLISFILLFFIMVLIIIYLQ     50

BSNT_02519___     51 TPISKVSTISVTGNENVSKKEIIDLSDINSGDTEFWSLDKQKTEKKIQQN    100
                     |||||:|::::||||:||.|:::.||.|..|:||||:|:|..|...|:||
BPUM_1417___d     51 TPISKISSLTITGNEHVSTKQLVKLSQIKEGETEFWNLNKDTTADHIKQN    100

BSNT_02519___    101 KLVKKAEISKSLPNKINIAIEEYKAIAYLEKDDVYYEVLENGSVLPNEVT    150
                     ||:|...|.|..|||::||::||..||||:|.::|||:||||:.||.|||
BPUM_1417___d    101 KLIKSVSIKKHFPNKVSIAVKEYANIAYLQKGNLYYELLENGTALPEEVT    150

BSNT_02519___    151 PDDAGPILVNWTNAKKRSQMAKQLDALSKSLKQSISEIYYTPVKMDENRI    200
                     |..||||.|:|.|.:|..|..|.|:.|..|:::.|||:||.|...::..:
BPUM_1417___d    151 PSHAGPIFVDWDNKEKLKQTVKSLNQLPASIQELISEVYYVPTNSNKWLV    200

BSNT_02519___    201 KLYMNDGYVVTASIKTFADRMKTYPSIISQLSSNKKGIIHLEVATYFEEF    250
                     |.|||||..|.||||||.|:|||||:|:.:|||::||.||:|||||||.|
BPUM_1417___d    201 KFYMNDGNTVIASIKTFGDKMKTYPAIVKELSSSEKGTIHMEVATYFEAF    250

BSNT_02519___    251 GKNDKAAKKEDEN    263
                         |:.||:||.
BPUM_1417___d    251 ----KSKKKDDER    259


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