Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02516 and BPUM_1416

See DNA alignment / Visit BSNT_02516 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_02516___murB.1.24716.seq
#    -bsequence pep-align/BPUM_1416___murB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02516___murB-BPUM_1416___murB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02516___murB-BPUM_1416___murB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02516___murB
# 2: BPUM_1416___murB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     229/303 (75.6%)
# Similarity:   266/303 (87.8%)
# Gaps:           0/303 ( 0.0%)
# Score: 1217.0
# 
#
#=======================================

BSNT_02516___      1 MEKVIQELKEREVGKVLANEPLANHTTMKIGGPADVLVIPSSVDAVKDIM     50
                     ||.:..||.|.:|||||.|||||||||||||||||:|:||..:||||.||
BPUM_1416___m      1 MENLKNELLEAQVGKVLENEPLANHTTMKIGGPADLLIIPKDIDAVKTIM     50

BSNT_02516___     51 DVIKKYDVKWTVIGRGSNLLVLDEGIRGVVIKLGAGLDHLELEGEQVTVG    100
                     |.:||:...||||||||||||||:||||||:|||.|||||.:..|::|||
BPUM_1416___m     51 DHVKKHQTNWTVIGRGSNLLVLDKGIRGVVLKLGTGLDHLTVNDEEITVG    100

BSNT_02516___    101 GGYSVVRLATSLSKKGLSGLEFAAGIPGSVGGAVYMNAGAHGSDMSEILV    150
                     ||||||||||||||:||||||||||||||:||||||||||||||:|:|||
BPUM_1416___m    101 GGYSVVRLATSLSKQGLSGLEFAAGIPGSIGGAVYMNAGAHGSDISKILV    150

BSNT_02516___    151 KAHILFEDGTIEWLTNEQMDFSYRTSVLQKKRPGVCLEAVLQLEQKDKES    200
                     ||.||||||:|||||||||:||||||||||:|||:.||||.:|:|.|:|.
BPUM_1416___m    151 KARILFEDGSIEWLTNEQMNFSYRTSVLQKERPGIVLEAVFKLKQDDREK    200

BSNT_02516___    201 IVQQMQSNKDYRKNTQPYSSPCAGSIFRNPLPNHAGNLVEKAGLKGYQIG    250
                     |.::||.||||||.||||:.||||||||||||.:||.|||||.|||||:|
BPUM_1416___m    201 ITKKMQQNKDYRKETQPYNRPCAGSIFRNPLPEYAGQLVEKANLKGYQLG    250

BSNT_02516___    251 GAKISEMHGNFIVNAGGASAKDVLDLIDHVKKTIREKYEIDMHTEVEIIG    300
                     ||:||:||||||||||||:|:||||||..::|.|:|.|.::|||||||||
BPUM_1416___m    251 GARISDMHGNFIVNAGGATAQDVLDLIQFIQKKIKEDYNVEMHTEVEIIG    300

BSNT_02516___    301 GNR    303
                     ...
BPUM_1416___m    301 EEN    303


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